Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00479 ATGAGACAAGCCAGAACATACTCAAGATCAAATCTTTCAGGAGAGATATCCGGTAGGACTGTGCCTCATTTGCTACCGTTGGCAAGGATAAAGAAGATCATGAAGAAGTCGGGCGAGGATGTAAAGATGATTTCTGGTGAGGCACCAATTGTTTTCTCCAAGGCATGCGAACTGTTTATAGAAGAGCTAACACTAAGGTCATGGATGGTAACCCTTCAAGGCAAGAGAAGGACATTACACAAAGAAGATGTCGCGGCTGCAGTAACAGCGACCGACATCTTCGACTTCCTTGTTACCACGGTGTCTGATTCTAATAGCTGTGACAGCACTCCTGCAAACTAG 342 0.4532 MRQARTYSRSNLSGEISGRTVPHLLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTLRSWMVTLQGKRRTLHKEDVAAAVTATDIFDFLVTTVSDSNSCDSTPAN* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00479 113 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 15 103 - -
Eupl14g00479 113 Gene3D Histone, subunit A 3 102 IPR009072 GO:0046982
Eupl14g00479 113 SUPERFAMILY Histone-fold 18 97 IPR009072 GO:0046982
Eupl14g00479 113 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 88 IPR003958 -
Eupl14g00479 113 FunFam Nuclear transcription factor Y subunit C 3 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00479 Eupl-Chr14 5827234 5827575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00479 23 101 CCAAT-HAP5 Transcription Factor Family AT1G54830 72.152 2.65e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl14g00479 CBFD_NFYB_HMF 1.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00479 - - msin:131225736 172.94