Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00459 ATGGATGGGAGGGAAGCCATGGCTTTACCTGGGTCGGCGTCTTATTATATGCAGAGAGGGGTAACTGGATCAGGGTCTGGAACACACACTGGGTTACATGGGCCACCGGGTTTTCGTCCATTGTCTAATCCGAGTATACCAGTTCAATCAAATATCGGAGGCAGTTCTGTCGGATCAACATTTCCGATAGAGTCATCGTCGGCAATTTTGCCTCATGGTGTTAATGTGGGTATGCCTGCCGGAATGCCGATGGGCGAGCCTGTAAGGAGAAAGAGGGGAAGACCTCGAAAATATGGACCTGATGGGAATGTATCATTGGCATTGTCTCCCACGTCGTCTACTCGTTCTCCAGCAGCATCGCTCTCACCAACCCAGAAGCGGGGGAGAGGGCGGCCACCCGGAACTGGGAGGAAGCAACAATTAGCATCTCTGGGTGAATGGATCTCTGGTTCAGCTGGAATGGGTTTTACTCCACATATCATCACCATTGCAATAGGAGAGGATATTGCAACAAAAATAATGTCATTTTCACAACAGGGGCCAAGGGCTGTCTGCATCCTTTCAGCTGTTGGTGCTGTCTCAACAGTAACACTTCGTCAGCCCGCAACTTCTGGTGGTACCGTCACATATGAGGGCCGTTTTGAGATACTATGCTTGTCGGGCTCGTACTTGCTAACTGATAATGGCGGGTCCCGTAGTCGAACAGGTGGTCTAAGTGTCTCACTTTCTAGTCCTGATGGCCGTGTCATCGGTGGGGGAGTTGGGGGAATGCTTATTGCTGCAAGCCCAGTCCAGGTGATAGTAGGGAGTTTTGTATATAGTGGTTCAAAGCCAAAGAACAAAGCTGGGGTCGGTTCAGAATCCGGTGCGGACTCCGATCTTCCAACAGGTGATCAATCTGCCACCCCAACCAGCATTCCACCCAACCGAAATCTCACTGCTAGTTCAGCGATGAGTGGGTGGCCTGGTTCACGGCCAGTGGAGATGAGGAATCCTGTCCAAATCGATATTGATTTAACACGTGGATGA 1029 0.5073 MDGREAMALPGSASYYMQRGVTGSGSGTHTGLHGPPGFRPLSNPSIPVQSNIGGSSVGSTFPIESSSAILPHGVNVGMPAGMPMGEPVRRKRGRPRKYGPDGNVSLALSPTSSTRSPAASLSPTQKRGRGRPPGTGRKQQLASLGEWISGSAGMGFTPHIITIAIGEDIATKIMSFSQQGPRAVCILSAVGAVSTVTLRQPATSGGTVTYEGRFEILCLSGSYLLTDNGGSRSRTGGLSVSLSSPDGRVIGGGVGGMLIAASPVQVIVGSFVYSGSKPKNKAGVGSESGADSDLPTGDQSATPTSIPPNRNLTASSAMSGWPGSRPVEMRNPVQIDIDLTRG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00459 342 MobiDBLite consensus disorder prediction 278 342 - -
Eupl14g00459 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 311 IPR039605 GO:0003680
Eupl14g00459 342 CDD DUF296 157 271 IPR005175 -
Eupl14g00459 342 Gene3D - 158 285 - -
Eupl14g00459 342 MobiDBLite consensus disorder prediction 19 45 - -
Eupl14g00459 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 156 273 - -
Eupl14g00459 342 FunFam AT-hook motif nuclear-localized protein 1-like 158 288 - -
Eupl14g00459 342 MobiDBLite consensus disorder prediction 79 140 - -
Eupl14g00459 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 272 IPR005175 -
Eupl14g00459 342 MobiDBLite consensus disorder prediction 105 123 - -
Eupl14g00459 342 MobiDBLite consensus disorder prediction 292 320 - -
Eupl14g00459 342 ProSiteProfiles PPC domain profile profile. 152 296 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00459 Eupl-Chr14 5611016 5621712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00459 1 342 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.545 4.70e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00459 - - nnu:104596086 514.227