Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00416 ATGCCTGCAAAAGTGAGGTCCTGTAACAGTCTAGATGCGATGAAGTCTGGGCAGAAGGTTGGGAAGCCAGAGGAGGGAAATGATTCCCTTGACAATTTCATCAGACAAGCAATAGGAAAAGAACCTGTCCTTTCTTTCTCAAGGGCGGGTGACAGCCCAGTTCAGTTGATTCAATTACTGCACGCTTTAGACCAGCAAGGTACTGGCAAACTTTCTAAAGGTTCAAAGCTTAACAACACTGTAGAAGTGAAGGAACGTCCTCTTGAGCATTGCAACGGTGTGAGCTCATTTGCATCTGAGATGAATGGGATTAAGGAATCTTCTCACCCTATTAAAAGTAGTGGAGTCCCTGTAAAGGGGATGAAGAGTGCCTCTGAACACATGCAAACTCTCAAAATCCCTGAGGCTGTTGTTGCCTTTGCTCAGGCCGCTGCTAAGGCCAATGGTGAGCCTGAAAAATATCTCCCAGGATGGCCATTGTTGTCTCCTCCTAAGGTACAGATGCAAAAGTGTGATAAATGTTCTCGAGAATTTTGCTCACCTATTAATTACCGAAGGCATATACGAGTGCATCGCCGGTCTTTGAACATTGATAAGGATTCTTCTAAGAATAGGGATTTCTTGGGTGCATTTTGGGATAAGTTGTCTTTGGACGAGGCGAAGGAAATTATATCATTCAAAAATGTGACATTGGAGGAAGTTCCTGGATCTTTGATTTTAAAGGAATTGACATTATTGATCCGTAAGCCGGGGTTTTCTTCACTGCCAGAATTTTATGTAATGGCTGGTGCAGCTCTTTTGGATGTTATCCAAGCTAGGTCTTCGAGGTTTCCTATAACCTCACAGGAATTATTCAGTATCCTTGATGATGCAAGTGAGAAGACATTCTTGTGTGCTGGCACAGCTATATCCATGCAAAAATTTGTGTTTGATGGGGAAGCTGGGAAGAATGGTCTTGAGATGAAGAATTTAGTTGCTAGCACTAGTTTTCTGGTTGAACAAAAATTGGTTAAGGCATGGCTTGCCGATAAGGATGTGGAAGCTCTGAGGTGTCAGAAGTTGCTTGTGGAGGAAGAGGAAGCTGCTCAGAAAAGGCAAGCTGAACTCTTGGAAAGGAGAAAGCTGAAGAAGCTTAGGCAAAAAGAGCAGAAAGCAAGGGAGCAAATTGACGTGGACGAGGCAGACTTCAAGCAAGGTTTCCCAGATTCCTTGGAGGTTGAACCTTCTTCTGCGGGAATCTCCGGTCAACTGGCCAACTCCTTTTCAGATTCTCCAGAAGCATCATCGGATCCTATTCAACCTTTTCTGGTGCCTGTCCGACTTCTGAACACTGATGAAGAAGCAGATAACAGGTGTCACTTAGGATTTGGTGATGTTGATATAGACACGGGTTCTGGTAATGCTGATTTGGCCAGTTGTAAGAATGTTGGCCACCAAATGCAGCGGGTAAGTGGCCGGCGGCCGCTTATTGTTGCTCGACGGTCAGCGACGAATCCACAACGGGGTGCACCGAATGGCTTCCATGGGGGTCAAGTTCTTCCGGTGTTGAAGTTGGGACCTGTCCAGAAGCATGGAATCTACAGGGACCAGAGGGCTGCTGCTTCTCTAGCCAACAGCCATAAGATCTGGGCCCGGAAAACAAAACCAGAGAATGAAGGAGAGGATTTGAATGCCAGAGTACAAAGAGAATCAAGTGATCAACCAGATCAAAATGAGAACTGTGAGGTGTTGATAGGTTCTATTTCTGTCACACTTGGAGATTGCAGTGGCAGGCATCAGGGAGATATTTTGGGAACCGCCTTTGATCAGTTTGCTGCAGACCATCAACCACCAAGGCAGAATAATGTCCTTGAGAAGCTGGCCAAACCCGATTCTGGTCAAAGTGGCATGAGCAGGTCGAGGGTAAAGCTCTGGAGACCAGTTGGCAGGCATGAAGCTGGAAATTTGATGACAGTTCAAAGCGACAAGAGAGAAGCTGAAGTGGATGTGGTTTCTGACAAAGCTGCTGACAGAACTCTAATGAGCGAAAGGTGTCTGCCTCGTGGTGCTACTGATGAAACTAGCGCTTCGAGCAGGATTGATTCTTCAGCAGTGCTAGAAGATGCAGATCCAAGAGGCTTGAGATTGTTCTCCAGCCGTGCTGCAGAGGCTTTCCTAACGCAGCGATGGAAGGAGGCTATTGCTGCAGACCATGTGGAGCTGGTCCTATCCCCAGAAACAGAACCGCCGGGTTGCCCTGAGATCCAAAATGATGCTCAAGTAGCGACACCATTACCATCAGATTTTTGCAATTGTAGTGTTCTTTGCAGTGCTGAGAATCGGCTGGCTGGTGTGGGCAATCCTGAATCTGTAGCTGTGGGAGCTCCTAAAGCCAAGTTCAGAGGAAAGACTGAGAAAGGTTGTAGGCTAAAGTACATCCCCAAGCATAGAAACAGTACCTGA 2442 0.4652 MPAKVRSCNSLDAMKSGQKVGKPEEGNDSLDNFIRQAIGKEPVLSFSRAGDSPVQLIQLLHALDQQGTGKLSKGSKLNNTVEVKERPLEHCNGVSSFASEMNGIKESSHPIKSSGVPVKGMKSASEHMQTLKIPEAVVAFAQAAAKANGEPEKYLPGWPLLSPPKVQMQKCDKCSREFCSPINYRRHIRVHRRSLNIDKDSSKNRDFLGAFWDKLSLDEAKEIISFKNVTLEEVPGSLILKELTLLIRKPGFSSLPEFYVMAGAALLDVIQARSSRFPITSQELFSILDDASEKTFLCAGTAISMQKFVFDGEAGKNGLEMKNLVASTSFLVEQKLVKAWLADKDVEALRCQKLLVEEEEAAQKRQAELLERRKLKKLRQKEQKAREQIDVDEADFKQGFPDSLEVEPSSAGISGQLANSFSDSPEASSDPIQPFLVPVRLLNTDEEADNRCHLGFGDVDIDTGSGNADLASCKNVGHQMQRVSGRRPLIVARRSATNPQRGAPNGFHGGQVLPVLKLGPVQKHGIYRDQRAAASLANSHKIWARKTKPENEGEDLNARVQRESSDQPDQNENCEVLIGSISVTLGDCSGRHQGDILGTAFDQFAADHQPPRQNNVLEKLAKPDSGQSGMSRSRVKLWRPVGRHEAGNLMTVQSDKREAEVDVVSDKAADRTLMSERCLPRGATDETSASSRIDSSAVLEDADPRGLRLFSSRAAEAFLTQRWKEAIAADHVELVLSPETEPPGCPEIQNDAQVATPLPSDFCNCSVLCSAENRLAGVGNPESVAVGAPKAKFRGKTEKGCRLKYIPKHRNST* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00416 813 MobiDBLite consensus disorder prediction 545 572 - -
Eupl14g00416 813 MobiDBLite consensus disorder prediction 400 429 - -
Eupl14g00416 813 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
Eupl14g00416 813 Coils Coil 375 395 - -
Eupl14g00416 813 MobiDBLite consensus disorder prediction 545 569 - -
Eupl14g00416 813 MobiDBLite consensus disorder prediction 409 429 - -
Eupl14g00416 813 MobiDBLite consensus disorder prediction 1 28 - -
Eupl14g00416 813 SMART c2h2final6 169 191 IPR013087 -
Eupl14g00416 813 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 191 IPR013087 -
Eupl14g00416 813 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00416 Eupl-Chr14 4978989 4989961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00416 156 810 C2H2 Transcription Factor Family AT4G25610 39.334 8.22e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl14g00416 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00416 - - ming:122071282 1003.43