Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00411 ATGGAGGGTAAAGAGGAGGATGTGAAGCTTGGAGCAAACAAGTTCTCAGAGAGGCAGCCAATAGGGACTTCAGCACAGACAGACAAGGATTACAAGGAGCCACCACCAGCTCCATTGTTTGAGCCTGGGGAGGTGCAATCATGGTCCTTTTGGAGGGCTGGGATTGCAGAGTTCATGGCCACTTTTCTGTTTCTCTATATCACTATTTTGACTGTGATGGGTGTGACTAGGGCTCCTAACAAGTGTGCTTCAGTGGGTATCCAGGGGATTGCTTGGGCTTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGGTGGTCATATTAACCCTGCTGTGACCTTTGGTCTACTTTTGGCAAGGAAGCTCTCCTTAACCAGGGCAGTGTTCTACATGGTGATGCAATGCCTTGGTGCCATCTGTGGTGCCGGTGTTGTTAAAGGCTTCCAAAAGACCCCCTACCAGTTGAATGGTGGTGGTGCCAACGTTGTAGCCCCTGGTTACACCAAGGGTGATGGTCTTGGTGCTGAGATCGTCGGCACCTTTGTCCTTGTTTACACTGTTTTCTCTGCAACTGACGCCAAGAGAAGCGCCAGAGACTCTCACGTCCCAATATTGGCTCCTCTCCCAATTGGGTTTGCAGTGTTCTTGGTACACTTGGCAACCATCCCCATCACAGGAACTGGCATCAACCCTGCTAGGAGTCTTGGAGCTGCCATCATCTACAACAAAGATCATGCATGGGATGATCATTGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCCCTTGCTGCAGTGTATCATCAAATCATCATCAGAGCCATCCCATTCAAGTCCAGGGCCTAA 861 0.5029 MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEPPPAPLFEPGEVQSWSFWRAGIAEFMATFLFLYITILTVMGVTRAPNKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFQKTPYQLNGGGANVVAPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAAVYHQIIIRAIPFKSRA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00411 286 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 281 IPR034294 -
Eupl14g00411 286 NCBIfam MIP family channel protein 56 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 FunFam Probable aquaporin PIP1-2 37 286 - -
Eupl14g00411 286 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl14g00411 286 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
Eupl14g00411 286 MobiDBLite consensus disorder prediction 1 35 - -
Eupl14g00411 286 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00411 Eupl-Chr14 4917206 4920391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00411 1 285 Major Intrinsic Protein MIP AT4G23400 90.559 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00411 K09872 - twl:119984587 557.37