Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00384 ATGGCAGGATGGTCGATTTTAATTCTTCGAAATCTTCAGAGCAATGGGTTCTGCTTGGATATTGATGATGCTTCTCTGAAAGTGGGTCTCGATGGTATTAAGGATCATAAGCTCCGATGCTCGTTCGACCAGATTCTCTCCGTTTTTCTCAAAGAAATCTCCCTCACAGAAGATACTCGACCTCTACCTGCAATGCTCGGAGATGGGCGATGTGTGGATTTGTTCAAACTCTTCTGGGTCGTGAGGGAAAAGGGCGGGTACCATTCAGTGTCGAAATATGGATTGTGGGCTTCGGTGGCTGAAGAATCCGGATTGGGTTCTGGACTTTCATCGTCTGTAAAATTGATTTACATCAAGTATTTGGATTCGTTGGATCGATGGGTACGGAGAAATTTCAAATCTAAGAGCTTAGGTGGAGATTTAAGTATAGCGGACAGTGGTGGGGATTTGGATTTGTTGTCGTTGTGGCTGCAGACGGAGTTTAAAGATTTGTTATGCGATATGTCGGTTCAGAAGGAGATAGTTGAGGAGCCCGCTCTGTTGGATTTGGAGAAGAATGAGTTTCGAGTATCACCTGTGGAAAACATGAATGAGGTTGGGAGTGCGACAGAGTCTGGCGGAGGCAAGAAATGTGTTGATGATGACGAAGAGGTTATGACCTTGGACCCTTGTGTAGTTAACGAGGAAGACGCGTATTCTCGTAAGAGAAAGCGAGAGACTTTATCAGGAATGCTGAATTGGGTGACTGAGATTGCCAAGAATCCTGGGGATCCTGAGATTGGGTTGTTATTAGAAGCATCTAAACAGAAGGAAAATGGAGATGAGGAGTTTCAGGGTTTGGCTCTGGTAACTCGAAAGGCACTGCTTCAAACAAGGCATGTTTATATGAGTTCAGAAAGTTCTCTTTTGCAGAAAAAGCAGAAGATGCACCCTTCCATGTACGAGGATCAAATTGGTGCTGATCACCAGTCTATAGAGAGACTAAGATGCAGCCGGAGGCTCCTTTCCCAGAAAAAATCTTACTTGCGCTCTTGTTCTGAGTCATCTGAAACCACTCAAAGTGACTCGGACATATCTCCTTGCATTGCAGGGATGGAAAACCATCCGAAAAAACAATCACTTGGAATTGCTGATTCTTTAACTGCAGATAGAGTAGTTAATCCATTTGATGACGAAAAGGTCCGTAAGCGGGTACCTGTAGGCCCACTCTTTCAAGCTGAAGTACCAGAATGGACTGGTGTGGCTTCCGAAAGTGATTCCAAATGGTTGGGGATGCAGCATTGGCCACTGATAATGAAGGAGCACAACACAATCATTGAAAGGCATCCTATTGGAAAGGGTAGACAAGATTCATGTGGCTGCCCACTTCTAGGTTCTGTTGAATGTGTTAGATTTCATATTGCCGAGAAAAGGGTGAGACTGAAGCTTGAATTGGGCTCTGCTTTCTACAATTGGAGATTCCATTGTATGGGTGAAGAAGTTTCCCTTTCTTGGACACAGGAAGAAGAAAAGAAGTTTAAGTCTATAGTGAGGTTAAACCCTCCATCTCTATACAAGTGTTTCTGGGACCAGGCATTCAGATGCTTTCCTACCAAAAACTGGAAAAGCTTAGTGAGCTATTACTTCAATGTGTTTCTGCTGCGGCGCAGAAGTTACCAGAACCGGGTGACTCCACACAACATTGACAGTGACGATGATGAATCAGAGCTTGGATCTGTAAGTAACGGTTTTGGGCATGAAGCAGTTAAGTTGGTCTCCAAGTCCATGTTCTGTGCTCAGAATAATCAGTGCATTGATTTGTAA 1803 0.4409 MAGWSILILRNLQSNGFCLDIDDASLKVGLDGIKDHKLRCSFDQILSVFLKEISLTEDTRPLPAMLGDGRCVDLFKLFWVVREKGGYHSVSKYGLWASVAEESGLGSGLSSSVKLIYIKYLDSLDRWVRRNFKSKSLGGDLSIADSGGDLDLLSLWLQTEFKDLLCDMSVQKEIVEEPALLDLEKNEFRVSPVENMNEVGSATESGGGKKCVDDDEEVMTLDPCVVNEEDAYSRKRKRETLSGMLNWVTEIAKNPGDPEIGLLLEASKQKENGDEEFQGLALVTRKALLQTRHVYMSSESSLLQKKQKMHPSMYEDQIGADHQSIERLRCSRRLLSQKKSYLRSCSESSETTQSDSDISPCIAGMENHPKKQSLGIADSLTADRVVNPFDDEKVRKRVPVGPLFQAEVPEWTGVASESDSKWLGMQHWPLIMKEHNTIIERHPIGKGRQDSCGCPLLGSVECVRFHIAEKRVRLKLELGSAFYNWRFHCMGEEVSLSWTQEEEKKFKSIVRLNPPSLYKCFWDQAFRCFPTKNWKSLVSYYFNVFLLRRRSYQNRVTPHNIDSDDDESELGSVSNGFGHEAVKLVSKSMFCAQNNQCIDL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00384 600 SMART bright_3 37 130 IPR001606 GO:0003677
Eupl14g00384 600 SMART ELM2_2 398 449 IPR000949 -
Eupl14g00384 600 Gene3D - 28 137 IPR036431 GO:0003677
Eupl14g00384 600 SMART ARID_2 33 125 - -
Eupl14g00384 600 CDD ARID 42 121 - -
Eupl14g00384 600 SUPERFAMILY ARID-like 41 130 IPR036431 GO:0003677
Eupl14g00384 600 Pfam ARID/BRIGHT DNA binding domain 60 123 IPR001606 GO:0003677
Eupl14g00384 600 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 35 596 - -
Eupl14g00384 600 CDD SANT 497 545 IPR001005 -
Eupl14g00384 600 ProSiteProfiles ARID domain profile. 36 129 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00384 Eupl-Chr14 4626895 4633246 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Eupl14g00384 ARID 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00384 - - nnu:104596016 652.899