Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00383 ATGGGAGGTTGCTGTTGTTGTTCTTCCAGAAGAGCTCAACTGAATGAGACACCAGTATACTATTACTGCCCACGAGCTTTAGAAGAGCTTGAGCCTTTGTCATCCCCCCATGGTGCAGTTTCTGCACACTCTACAGGACTCCTAGTTGATACAAACCTGGACACATCAACACCTGACACCTATCGAGCACCTCCTGCGCCAATGCCCTATGATTTGGATTTAGGACGTCCACAAACACCACCGGGCACTCAGGAAAGTGGTGGCAACAAGATTGATGTAGCAGTTGTAACAACGGATTCTGAATCTATCGGAGAACCAATAAGTGGCAGTGCGTTTGAAACTTTGGCTAATTGTGAAGGTCTGAAGGAATCAGACTGCAAATCTCAAGCAGATTCTGTGCTTCCATCCCAAAAGGAGTCTGAAGTGGAACCTTCAAAGTTGAGTGGACCTATTGTTTCAGCAACGGAAGAAGAGGATGTTTGTCCCACGTGTCTTGAAGAGTATGATGCGGATAATCCAAGAATTATAACAAAATGTGAACATCATTTTCACCTTTCGTGCATTCTTGAATGGCTGGAAAGAAGTGACACCTGCCCCGTATGCGATCAGGTTCTCCTTGGATGGCATTTTTTATATATGTTAGATGCTGTCATAACTAGATGA 663 0.4465 MGGCCCCSSRRAQLNETPVYYYCPRALEELEPLSSPHGAVSAHSTGLLVDTNLDTSTPDTYRAPPAPMPYDLDLGRPQTPPGTQESGGNKIDVAVVTTDSESIGEPISGSAFETLANCEGLKESDCKSQADSVLPSQKESEVEPSKLSGPIVSATEEEDVCPTCLEEYDADNPRIITKCEHHFHLSCILEWLERSDTCPVCDQVLLGWHFLYMLDAVITR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00383 220 MobiDBLite consensus disorder prediction 50 90 - -
Eupl14g00383 220 SMART ring_2 161 201 IPR001841 -
Eupl14g00383 220 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Eupl14g00383 220 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 40 205 - -
Eupl14g00383 220 Pfam RING-H2 zinc finger domain 154 201 IPR024766 GO:0008270
Eupl14g00383 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 206 IPR013083 -
Eupl14g00383 220 SUPERFAMILY RING/U-box 156 206 - -
Eupl14g00383 220 CDD RING-H2_AIRP1-like 157 205 - -
Eupl14g00383 220 FunFam Putative E3 ubiquitin-protein ligase RHB1A 137 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00383 Eupl-Chr14 4613147 4621282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00383 1 203 C3H Transcription Factor Family AT4G00335 55.665 7.95e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00383 - - tss:122666157 325.094