Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00380 ATGCGAAGCCCCGGTGCACCGTATGGAAGCCGGAAACCTAGCTCCGACGGATGGAAAACGCCGGACCGCTCTGATTTTTCTCGGAGCTCCACCTATTCCAGCTCCTCTACCGGCCGGAAAACTTCCTCAGGCCGGAATCCTGTGAAGATTGCGGCAAGATCCTTTGCCGGAGCGATTGGTGCGTGTTTCGCCCCGCCGGAGATGAAATCTTCTTCAGGCGCAGGAGATTTTGATGAATTCAAGACTCCTTCTGTTCTAATTTCTTGGATGAAGGTTGTGTCGGATACTTCGAGTCGTGGCCGCGAAAGGCGGCGTAGTTCCAACCAAGGGATTTATTCCAGTTCATACAATTCAACCCAGACTACAGAAACTGGGGGTATTAAATTCACCTTGGCTGAGATATACAAGGTTACCAGGAACTTCTCCCCCTCCTTCAAGATCGGACAAGGTGGATTTGGGACAGTCTACAAAGGGAGGCTCGAAGATGGCACCCTAGTTGCGGTTAAACGTGCAAAGAAGAGCATATACGATACGCATTTGAATGTGGAGTTCCAAAGTGAGATCGGGACATTCGCACGGGTCGAGCATTTGAATTTGGTCAGATTCTTTGGGTATTTGGAACATGGAGACGAAAGGATTGTTGTTGTTGAGTATGTTCCTAATGGAACCCTCAGGGAACACTTGGACTGTTTAAATGGAAACATTCTTGACCTTGCTGCACGGCTGGATATTGCGATTGATGTCGCTCATGCAGTTACCTATCTCCATATGTATACAGAGCACCCTATCATCCACAGAGATATTAAGTCTTCAAACATCCTCATCACCGAAAACCTTCGCGCCAAGGTGGCTGACTTTGGGTTTGCTCGACTGGCCGCCGACAGTGATACAGGAGCCACTCATGTATCAACTCAAGTTAAAGGAACCGCCGGCTACTTAGACCCAGAGTACCTGAAAACGTATCAGCTGACTGAGAAGAGTGATGTTTTCTCCTTCGGCGTGTTGCTTGTCGAAATAGTGTCAGGCAGACGGCCTATTGAGCCCAAAAGGGAGCTCAAGGAACGGATAACTGCGAGATGGGCAATGAAGAAGTTCAGTGATGGGGATGCAATTCTAACATTGGACCCAAGGCTGACACGGACTCCAGCAGCTAATCTAGCACTAGAGAAGATTCTAGAGCTAGCCTTACAATGCTTGGCTCCTACAAGACAGAACCGGCCGAGCATGAGGAGGTGTGCGGAGATCCTTTGGAGCATCCGCAAGGATTACAGAGAGCTTGCAGCTTCAGACTTCCACTCGCTCTCCTCTCGTCCACAGAGGACCGCTTCCATTAGAGAAGAATAA 1344 0.4933 MRSPGAPYGSRKPSSDGWKTPDRSDFSRSSTYSSSSTGRKTSSGRNPVKIAARSFAGAIGACFAPPEMKSSSGAGDFDEFKTPSVLISWMKVVSDTSSRGRERRRSSNQGIYSSSYNSTQTTETGGIKFTLAEIYKVTRNFSPSFKIGQGGFGTVYKGRLEDGTLVAVKRAKKSIYDTHLNVEFQSEIGTFARVEHLNLVRFFGYLEHGDERIVVVEYVPNGTLREHLDCLNGNILDLAARLDIAIDVAHAVTYLHMYTEHPIIHRDIKSSNILITENLRAKVADFGFARLAADSDTGATHVSTQVKGTAGYLDPEYLKTYQLTEKSDVFSFGVLLVEIVSGRRPIEPKRELKERITARWAMKKFSDGDAILTLDPRLTRTPAANLALEKILELALQCLAPTRQNRPSMRRCAEILWSIRKDYRELAASDFHSLSSRPQRTASIREE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00380 447 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 219 430 - -
Eupl14g00380 447 MobiDBLite consensus disorder prediction 107 121 - -
Eupl14g00380 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Eupl14g00380 447 Gene3D Phosphorylase Kinase; domain 1 102 218 - -
Eupl14g00380 447 MobiDBLite consensus disorder prediction 1 46 - -
Eupl14g00380 447 MobiDBLite consensus disorder prediction 24 46 - -
Eupl14g00380 447 Gene3D Transferase(Phosphotransferase) domain 1 219 436 - -
Eupl14g00380 447 PANTHER OS01G0750732 PROTEIN 82 425 - -
Eupl14g00380 447 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 100 218 - -
Eupl14g00380 447 CDD STKc_IRAK 147 416 - -
Eupl14g00380 447 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Eupl14g00380 447 Pfam Protein kinase domain 146 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00380 447 SUPERFAMILY Protein kinase-like (PK-like) 117 419 IPR011009 -
Eupl14g00380 447 MobiDBLite consensus disorder prediction 97 121 - -
Eupl14g00380 447 ProSiteProfiles Protein kinase domain profile. 141 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00380 447 SMART serkin_6 141 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00380 Eupl-Chr14 4581024 4584151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00380 118 420 Receptor kinase-like Gene Family AT1G30570 44.590 4.32e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Eupl14g00380 Pkinase 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00380 - - nnu:104610644 662.529