Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00370 ATGGGGTTTCCAGTCGGCTACACTGAGCTTTTCCTTCCAAAGCTTCTTCTAAACACCCTTTCCCTTCTGGGTTTCATCAGAAAATTCATCTCCTGGCTTTTTCGCAATCTGGGTCTCGGAGATTTCCTCGAATCCGACAATGCCTGGACTGGGACGGACCGTCCAACCCACCTTCCAGAATTCCACTCCGTTTCCGCCTTTCTGATCCGTGAAATCTTACCCGTTGTGAAGTTCGAGGACTTGGTTTCAGGCGACGGAGACACGCCTGATAGCTGTGCTGTTTGTCTCTACGAGTTTGAGGGCAGGGAAGAAATCAGACAGTTGACGAACTGCCGCCACATTTTCCACAGGAGCTGTTTGGATCGTTGGATGGATCATGATCAGAAAACGTGCCCCCTTTGTAGAACTCCGTTTATCCCGGACGAGATGCAAGAGGCCTTCAATGAGCGGCTGTGGGCTGCTTCTGGGATTCCTGATTTCTATGGCGAGTACTCTTCGGTTTCCGGTTTGTAA 513 0.5049 MGFPVGYTELFLPKLLLNTLSLLGFIRKFISWLFRNLGLGDFLESDNAWTGTDRPTHLPEFHSVSAFLIREILPVVKFEDLVSGDGDTPDSCAVCLYEFEGREEIRQLTNCRHIFHRSCLDRWMDHDQKTCPLCRTPFIPDEMQEAFNERLWAASGIPDFYGEYSSVSGL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00370 170 SMART ring_2 92 134 IPR001841 -
Eupl14g00370 170 FunFam RING-H2 finger protein ATL73 69 142 - -
Eupl14g00370 170 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
Eupl14g00370 170 SUPERFAMILY RING/U-box 69 141 - -
Eupl14g00370 170 CDD RING-H2_RHA1-like 90 138 - -
Eupl14g00370 170 PANTHER RING ZINC FINGER PROTEIN-RELATED 21 155 - -
Eupl14g00370 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 142 IPR013083 -
Eupl14g00370 170 Pfam Ring finger domain 90 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00370 Eupl-Chr14 4483753 4484930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00370 1 156 C3H Transcription Factor Family AT1G63840 54.140 5.13e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00370 K16281 - nnu:104610658 296.589