Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl14g00363 | ATGGAGTCTCGCAGTCTGGTCGATGAACAGTGTGAAGGAAGGCTGTACATTGGTAACCTTGATCAGAGAATAACAGAGGCTCTCTTGATCAAGATGTTTTCTCCTTTCGGAAAGATTGTGTCTGAGGACTTTTTATGGCACACTCGAGGCCCAAAACGCGGAGAGCCACGTGGTTTTGCTTTTATCCAGTTTAGTACTAGAGAGGAAGCTAAACTGGCGAAGGAGAAGATGAACGGAAGATTGGCTTGTGGGCGCCCATTGGTTGTCCGCTTTGCTAGTGAGAAGTACTTGGTAGAAGCAGCAGCAAATCCTCCCAGAGCGGTTGGCGAGGCAAGCAAATCTAGTCTTGCGGGTAGCTCTTCAGGACAAATGAGCCGGAGTGCTAAAATAGCTGCAATAAAGAACAAACTGAAAGCCATTGAAGAAGAGAACTGTAGTTCAAAGAAGCCAAGGCAAGGTGACAGCATCACTTGA | 474 | 0.4705 | MESRSLVDEQCEGRLYIGNLDQRITEALLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFSTREEAKLAKEKMNGRLACGRPLVVRFASEKYLVEAAANPPRAVGEASKSSLAGSSSGQMSRSAKIAAIKNKLKAIEEENCSSKKPRQGDSIT* | 158 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl14g00363 | 157 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN | 9 | 136 | - | - | |
Eupl14g00363 | 157 | CDD | RRM_RBM18 | 14 | 93 | IPR039157 | - | |
Eupl14g00363 | 157 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 13 | 94 | IPR000504 | GO:0003723 | |
Eupl14g00363 | 157 | MobiDBLite | consensus disorder prediction | 103 | 127 | - | - | |
Eupl14g00363 | 157 | MobiDBLite | consensus disorder prediction | 113 | 127 | - | - | |
Eupl14g00363 | 157 | Gene3D | - | 11 | 100 | IPR012677 | - | |
Eupl14g00363 | 157 | SUPERFAMILY | RNA-binding domain, RBD | 11 | 97 | IPR035979 | GO:0003676 | |
Eupl14g00363 | 157 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 15 | 87 | IPR000504 | GO:0003723 | |
Eupl14g00363 | 157 | SMART | rrm1_1 | 14 | 90 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl14g00363 | Eupl-Chr14 | 4390769 | 4394086 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl14g00363 | 15 | 95 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 40.741 | 4.46e-13 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl14g00363 | K24527 | - | ming:122073209 | 248.825 |