Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00363 ATGGAGTCTCGCAGTCTGGTCGATGAACAGTGTGAAGGAAGGCTGTACATTGGTAACCTTGATCAGAGAATAACAGAGGCTCTCTTGATCAAGATGTTTTCTCCTTTCGGAAAGATTGTGTCTGAGGACTTTTTATGGCACACTCGAGGCCCAAAACGCGGAGAGCCACGTGGTTTTGCTTTTATCCAGTTTAGTACTAGAGAGGAAGCTAAACTGGCGAAGGAGAAGATGAACGGAAGATTGGCTTGTGGGCGCCCATTGGTTGTCCGCTTTGCTAGTGAGAAGTACTTGGTAGAAGCAGCAGCAAATCCTCCCAGAGCGGTTGGCGAGGCAAGCAAATCTAGTCTTGCGGGTAGCTCTTCAGGACAAATGAGCCGGAGTGCTAAAATAGCTGCAATAAAGAACAAACTGAAAGCCATTGAAGAAGAGAACTGTAGTTCAAAGAAGCCAAGGCAAGGTGACAGCATCACTTGA 474 0.4705 MESRSLVDEQCEGRLYIGNLDQRITEALLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFSTREEAKLAKEKMNGRLACGRPLVVRFASEKYLVEAAANPPRAVGEASKSSLAGSSSGQMSRSAKIAAIKNKLKAIEEENCSSKKPRQGDSIT* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00363 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 9 136 - -
Eupl14g00363 157 CDD RRM_RBM18 14 93 IPR039157 -
Eupl14g00363 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Eupl14g00363 157 MobiDBLite consensus disorder prediction 103 127 - -
Eupl14g00363 157 MobiDBLite consensus disorder prediction 113 127 - -
Eupl14g00363 157 Gene3D - 11 100 IPR012677 -
Eupl14g00363 157 SUPERFAMILY RNA-binding domain, RBD 11 97 IPR035979 GO:0003676
Eupl14g00363 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
Eupl14g00363 157 SMART rrm1_1 14 90 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00363 Eupl-Chr14 4390769 4394086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00363 15 95 Eukaryotic Initiation Factors Gene Family AT3G16380 40.741 4.46e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00363 K24527 - ming:122073209 248.825