Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00344 ATGGGTCACCATTCCTGCTGCAACCAACAAAAGGTTAAGAGAGGCCTTTGGTCCCCCGAGGAAGACGAAAAGCTCGTTCGATACATAACCACCCATGGCTATGGTTGTTGGAGTGAAGTTCCTGAGAAAGCAGGGCTTCAAAGATGTGGTAAAAGTTGCCGCTTGAGATGGATCAACTATTTGAGACCTGATATCAGAAGAGGGAGGTTTACACCAGAGGAAGAGAAGTTGATAATCAGCCTTCATGGTGTTGTGGGGAACAGGTGGGCTCACATAGCAAGTCACTTGCCTGGGAGAACAGACAATGAGATAAAGAACTATTGGAATTCATGGATTAAAAAGAAGATACGAAAGCCTCCCGCTCCTCCAACAACAATCTCGCCAAATATCGAGCTTGTTCAATCGGGTTATGGTTTGAATCAATTAGATGTAATGAATCAAGATTTATCAGCAAGGCCACCACTTCCAGACCAAACCATGTTTTCTCCTTCTTGTCCCCTTTTCATGTTGGACACCGGTTTAATCGATGGAATTGGCGGCGGTAATGCAAGAGCAGATATTTTCCATGAAGCTGCAAGCCTAAACTCTGAGACTTGGCATGTAAATCACCATCAAGTTCAAGCTCTTCCTCCTCCTCCGGCATTTACAGGTTGTATGGATTCGAATTATTTGCCACCAATGTTGGAGAATATGGAAAACATGGTCCCCATAGAGGTGCAATCATGTAGTATGGGTGATGATGGAGAAACAGCCATGGAGTGCTTACAAAGACAGGAGTTGAGTGAATGGGTAGATTCCCAGCAATGTCCAGGTTTTCTAATATGGGAGCATTTTGAAGCACAGCTCGGAGGGGATGGAGTTGCACCAGCTTCATCAAATATGGGAACTTTGCTATCTTCTTACCCTTCTTCTTTATAA 918 0.4434 MGHHSCCNQQKVKRGLWSPEEDEKLVRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPPAPPTTISPNIELVQSGYGLNQLDVMNQDLSARPPLPDQTMFSPSCPLFMLDTGLIDGIGGGNARADIFHEAASLNSETWHVNHHQVQALPPPPAFTGCMDSNYLPPMLENMENMVPIEVQSCSMGDDGETAMECLQRQELSEWVDSQQCPGFLIWEHFEAQLGGDGVAPASSNMGTLLSSYPSSL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00344 305 Gene3D - 6 66 - -
Eupl14g00344 305 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl14g00344 305 CDD SANT 69 112 IPR001005 -
Eupl14g00344 305 FunFam MYB transcription factor 6 66 - -
Eupl14g00344 305 PANTHER MYB DOMAIN PROTEIN 55 1 125 - -
Eupl14g00344 305 SMART sant 66 114 IPR001005 -
Eupl14g00344 305 SMART sant 13 63 IPR001005 -
Eupl14g00344 305 CDD SANT 17 61 IPR001005 -
Eupl14g00344 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl14g00344 305 Gene3D - 69 116 - -
Eupl14g00344 305 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Eupl14g00344 305 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl14g00344 305 FunFam Transcription factor MYB26 68 135 - -
Eupl14g00344 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Eupl14g00344 305 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Eupl14g00344 305 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00344 Eupl-Chr14 4229747 4231684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00344 1 288 MYB Transcription Factor Family AT1G63910 49.432 3.80e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl14g00344 Myb_DNA-binding 6.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00344 K09422 K02947 nnu:104600198 490.73