Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00330 ATGAGCGGCAGCCACGCCTTCGGGAAGACCATCTGCTCCATCTGCTATGAGGATCTGAAGCCCATCATCGAAGACCTTCAGGCCATCCCCATTTGCGGTCACGTCTTTCACGAGCTCTGTCTTCAACAGTGGTTCGAGTACTGCTCGAAGGCGAAAAAGACCACCTGCCCTGTGTGCAAGCAGAGATGTTGCCAAGAAAACGTTGGTCGGCTTTATTTCCAGTCAATCGGGGATCCGAACGATTTGATTCTCTCTCAGAAACCATTGGACGCAGGAGGAGACGAAGAAGAAGATCCACTGGTGTTGCGTAGGGAAGTCAAGAAGTTGGAGGGAAAGCTTTCGGGTTTCAGTTCTGCTTTCGATCGTCAACAACAGGATTTGAAACAACTCAATGAGGAGCTTTGTCTCTGCAAGGAGCACGCCAATAAAGAGGCAGCATTGAGGAATGAAGCTTTGCAACAGAAAGCATCCATTCAACAATTGCTTCAATCACAATCCGCGGAACTTGTTAAAACGTCATCGGAGTGTTCCAGGCTTCAAGAGAGGAATATGGCTCTAGCTAAAGAGCTCACTGCGCTCAAATTGGTATCAGATTTGAACCTGGACGAAGAAGAGGTAGTGAAGCTTGCTTCATTTGGTCGTGGGACTAACAGCAAAGATACAATAGATATTCTAAAGAAGTCTCTTGTCCTCCGTAACAAGAGTTACAAAGAATTGATGGCCCAGTGCAACCTTCTAGGAAGAGGAGAGACCCGTTCTCTTAAAAAGCTGGAGAGGGCTGAAGAGAAGATAAAGAAATTGAAGACAAGAGTGCGAGAACTGGAGATGGCCATTGAAGAAAAAGATACCAAAGTCTTAAGAGCTTTGAAAGCTTCGAAGAAAACTTCGGGTAAAGGGGTTGATCTGAATGGTGTCAAGTGGAACTCTAATACTCCATATGTCAGCAAAAGTTCATCAGAAGATCACATGGAGCAATTTGTTGAACCCATTATGGACTCGAACCAAAGTGATGGCCTGACCAATCATCCATTTCAGTTTAATAAAACTGGCAACTCTGTGTTTCACAAAGATTTGGGTGTAAATACATGCAAGAAGGATACAGATATAATTGCTATTGATCTAGAGAAAGATTTTAACTTCTTGATAGATGAGAATGCTCCTGAACTTCCGCCATCTGTACATGAAAATTCATCTTCTTTTCTGAAACATCAAACCAATGCCAGTTTTAGTGAGGATATACCTCTACAGAACTCCTGCATGTTGAGGCCAAGGGCAGCTTCTAATACCAACTTAGACGCTTCGATGAATGGTCAAAGTTGTTGGGTTGGGCTCTCAGGTTCAAGGACTGGTACTAGGAATGACATGAACAATGCTTCTGTTGGTGCTATGGAAGATGTGAAGCATATCAGCCATTCAACTTCAGCTGTGGAGACATCACATCTTGATGAATTTACAAAGGGTCCACATTTGCTTCAAATAAGAAAAGAGACTTCATGTCCTGTTCCAACTCCCTACCCAGGTGATCAATGTTTTGCTGGTGGACTTCTTGGGCCTGATGGAGCAAACACATATTTGGGGAAATGGTGCAAGCGGACTCAGACCAAGTCCTCAGTTGGGGATTTGATTGCTGTTGGAGCTGATGGAAGGGGTGGTAGGATTAAAGTTTTGAGATCTCAAAACCAGTCGGATGGTAAGGGGAGTTCATTGACGCCAAAGAGGTGCAAGTATGGAGCCAAACAAAGTGGTCCGCAGTCTCAAGGGTGCTTGCAAATAGAACACTTCTTTGGGAAGGCAGATCGATCGTAA 1806 0.4446 MSGSHAFGKTICSICYEDLKPIIEDLQAIPICGHVFHELCLQQWFEYCSKAKKTTCPVCKQRCCQENVGRLYFQSIGDPNDLILSQKPLDAGGDEEEDPLVLRREVKKLEGKLSGFSSAFDRQQQDLKQLNEELCLCKEHANKEAALRNEALQQKASIQQLLQSQSAELVKTSSECSRLQERNMALAKELTALKLVSDLNLDEEEVVKLASFGRGTNSKDTIDILKKSLVLRNKSYKELMAQCNLLGRGETRSLKKLERAEEKIKKLKTRVRELEMAIEEKDTKVLRALKASKKTSGKGVDLNGVKWNSNTPYVSKSSSEDHMEQFVEPIMDSNQSDGLTNHPFQFNKTGNSVFHKDLGVNTCKKDTDIIAIDLEKDFNFLIDENAPELPPSVHENSSSFLKHQTNASFSEDIPLQNSCMLRPRAASNTNLDASMNGQSCWVGLSGSRTGTRNDMNNASVGAMEDVKHISHSTSAVETSHLDEFTKGPHLLQIRKETSCPVPTPYPGDQCFAGGLLGPDGANTYLGKWCKRTQTKSSVGDLIAVGADGRGGRIKVLRSQNQSDGKGSSLTPKRCKYGAKQSGPQSQGCLQIEHFFGKADRS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00330 601 Coils Coil 113 133 - -
Eupl14g00330 601 Coils Coil 162 182 - -
Eupl14g00330 601 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 598 - -
Eupl14g00330 601 SMART ring_2 12 59 IPR001841 -
Eupl14g00330 601 SUPERFAMILY RING/U-box 9 64 - -
Eupl14g00330 601 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 186 IPR013083 -
Eupl14g00330 601 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Eupl14g00330 601 Pfam Ring finger domain 11 60 IPR001841 -
Eupl14g00330 601 Coils Coil 250 284 - -
Eupl14g00330 601 MobiDBLite consensus disorder prediction 558 585 - -
Eupl14g00330 601 CDD RING-H2 12 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00330 491 600 C3H Transcription Factor Family AT4G01270 45.455 1.72e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00330 K11985 - ming:122061291 624.009