Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00319 ATGGCGCCTAATCTCGAAAAGGGGGCAAAAGAGGCCTTCATGGACGATAATTTCGAGCTCGCAATCGATCTCTACACGCAGGCCATCGACATGGATCCGAGGAACGCAGATCTCTTCGCCGACCGCGCGCAAGCCAATATCAAGCTCCAGAGCTATACTGAGGCTGTTGCTGATGCAAACAGAGCAATTGAGTTGGATCCTAAAATGGCTAAGGCATACTTTCGTAAAGGCACTGCATGTTTTAAGCTGGAAGAATATCAGACTGCCAAGGCTGCCCTTGAAGCAGGTGCTTCCTTTGTACCTGGTGATTTAAGATTCACCAATTTAATCAAAGAATGTGATGAGCGTATTGCAGAGGAAACTGCTGGTGATCTACCAAAAGAATTGACGCACAATGCTCAACCAACCACTGCATCTCCTTCAGTTCTATCTAATTCATCAGATGTAACCACAGAAACTGTAAAACATGCCGAGCCGACAAATGACATATCCCTTCAACAGCCAGTGGCAGCTTCAGCTAAACCAAAATACAGGCACGAATACTACCAGAAGCCAGAGGAAGTAGTTTTGACCATATTTGCAAAGGGCATACCCGCTGAAAACGTGGTTATTGACTTCGGTGAACAGATACTAAGTGTTACCATTGATTTCCCTGGTGAAGATGCATATCATTTTCAACCTCGCTTATTTGGAAAGATAATGCCTGAGAAATGCAGATATGAAGTAATGTCAACCAAAATTGAAATCCGCCTTGCAAAGGCTGAAGCAATCGGCTGGACATCTCTAGAATTTACTAGGGAAAATACAGTTCCACAGAAGATACATGTATCATTGGGTGTTGGGTCTCGACAACCCACATACCCATCTTCAAAATCAAGAGCAGTTGATTGGGATAAGCTGGAAGCTCTAGTGAAGAAAGAGGAGAAAGAAGAGAAGCTGGATGGCGATGCAGCTTTGAACAAACTGTTCCGTGATATATACCAAGATGCTGATGAGGACACAAGGCGGGCCATGAGTAAATCTTTTGTGGAGTCCAATGGGACGGTTCTGTCGACAAACTGGAAAGAAGTGGGCTCAAAGAAGGTAGAGGGCAGCCCTCCGGATGGTATGGAGATGAAGAAATGGGAGCGCTAA 1134 0.4506 MAPNLEKGAKEAFMDDNFELAIDLYTQAIDMDPRNADLFADRAQANIKLQSYTEAVADANRAIELDPKMAKAYFRKGTACFKLEEYQTAKAALEAGASFVPGDLRFTNLIKECDERIAEETAGDLPKELTHNAQPTTASPSVLSNSSDVTTETVKHAEPTNDISLQQPVAASAKPKYRHEYYQKPEEVVLTIFAKGIPAENVVIDFGEQILSVTIDFPGEDAYHFQPRLFGKIMPEKCRYEVMSTKIEIRLAKAEAIGWTSLEFTRENTVPQKIHVSLGVGSRQPTYPSSKSRAVDWDKLEALVKKEEKEEKLDGDAALNKLFRDIYQDADEDTRRAMSKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWER* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00319 377 SUPERFAMILY HSP20-like chaperones 170 271 IPR008978 -
Eupl14g00319 377 FunFam Protein SGT1 homolog 1 132 - -
Eupl14g00319 377 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Eupl14g00319 377 SUPERFAMILY TPR-like 9 113 IPR011990 GO:0005515
Eupl14g00319 377 MobiDBLite consensus disorder prediction 354 377 - -
Eupl14g00319 377 PANTHER PROTEIN SGT1 HOMOLOG 2 375 IPR044563 GO:0051087
Eupl14g00319 377 CDD p23_CS_SGT1_like 180 263 - -
Eupl14g00319 377 ProSiteProfiles SGS domain profile. 286 377 IPR007699 -
Eupl14g00319 377 ProSiteProfiles CS domain profile. 174 263 IPR007052 -
Eupl14g00319 377 MobiDBLite consensus disorder prediction 130 159 - -
Eupl14g00319 377 Gene3D Tetratricopeptide repeat domain 2 124 IPR011990 GO:0005515
Eupl14g00319 377 FunFam Protein SGT1 homolog A 172 275 - -
Eupl14g00319 377 MobiDBLite consensus disorder prediction 122 159 - -
Eupl14g00319 377 Pfam CS domain 178 253 IPR007052 -
Eupl14g00319 377 Gene3D - 175 265 IPR008978 -
Eupl14g00319 377 Pfam Tetratricopeptide repeat 37 68 IPR019734 GO:0005515
Eupl14g00319 377 Pfam Tetratricopeptide repeat 70 95 IPR019734 GO:0005515
Eupl14g00319 377 Pfam SGS domain 296 375 IPR007699 -
Eupl14g00319 377 SMART tpr_5 2 35 IPR019734 GO:0005515
Eupl14g00319 377 SMART tpr_5 36 69 IPR019734 GO:0005515
Eupl14g00319 377 SMART tpr_5 70 103 IPR019734 GO:0005515
Eupl14g00319 377 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00319 Eupl-Chr14 3939614 3950407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00319 1 86 U-box Gene Family AT3G07370 30.233 4.53e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00319 K12795 - msin:131245028 553.518