Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00308 ATGGAAGGTCAATCACCACCGCCGCCGCCGTCACTACCACCACCACCACCACCACATCATAAAACCTATAATATTACAGCTTCTTCAATATCCTACACCAAGTCCACCACCACCAATGCAACTACCTTTTTCTTCAAAACTTGCACTCAATCCCCACCTACTTACATCCTTCGTGACGTCTCCTTCACCGCCCACCCCTCACAGATCCTAGCCATTGTTGGTCCAAGCGGAGCTGGAAAATCTACTCTCCTAGACATATTAGCAGCACGTACCTCACCCACACATGGCACTCTTCTCCTCAATTCTTCCCCTCTCAACCCTTCCTCATTCCGAAAACTCTCCGCCTATGTTCCTCAACACGACGCATCCCTCCCATTACTCACAGTCTCAGAGACCTTCACCTTCGCCGCCCGCCTCCTCATCCCCAACACTTCCCAAATTCCCTCCGTTATTTCATCTCTCCTCACTGACCTACGCCTCTCCCACCTCGCTAACACCCGTCTTGCCTCTGGCCTCTCCGGTGGTGAACGTCGACGCGTCTCGATCGGCCTTAGCCTCCTCCATGACCCTGCCGTGTTATTTCTCGATGAACCCACGTCAGGTCTGGATAGTACATCCGCATTCAACGTAATGCAGACCCTCCGATCAATTGCTGCATCACGTTGGTGCACTGTAGTCCTCTCCATACACCAACCAAGCTTCAAGATCCTTTCCACCATTGATCGTATTCTATTACTATCAAAAGGAACAGTTGTACACCATGGTACAGTTTCTTCCCTTCAATACTTCTTACTCTCCAATGGCTTCACTGTCCCTCCACAGCTCAACGCACTAGAATACGCCATGGAGATACTAAACCAGCTTACACCTCAATCACTTCCTCCTCCTCCTCCTCCTCCTCCTCTTCATACTTCTTCAACTTCTCCTTCAAACAATGATACAAAAGAGATCAGATATAAGAGTTCAAGACTCCATGAAATCTTCACTCTTTACACCAGGTTTTGGACGATCATCTATAGAACAAGACAGCTTCTTTGGACAAATACATTAGAAGCTCTTGTAGTAGGAATTGTCTTGGGTACTATCTATATCCATGTTGGGTTTGATAAACAAGGAATTGAGAAACGATTTGGCCTTTTTGCCTTCACTCTAACTTTTCTTCTCTCTTCCACTACTGAAACTCTACCAATCTTCATTAATGAGAGACCAATTCTACTGAGAGAAACTTCAAGTGGTGTTTACAGGCTATCTTCTCATCTAATCGCCAACACACTTGTCTTCCTGCCTTACTTGCTAGCAATTGCGATGGTTTACTCAGTCTCTGTCTATTTCTTAGTGGGCCTTTGTGCTACTTGGCAAGCTTTTGCCTACTTCGTATTGGTAATATGGGTTGTCGTTCTCATGGCAAATTCATTTGTGCTCTTCTTGAGCTCTCTCGCTCCGAATTACGTCGCCGGTATGTCACTTGTTACGATATTTCTTGGTGCTTTCTTTCTCTTCTCCGGCTATTTCATCTCAAAAGATAGCTTGCCCAAGTACTGGCTCTTCATGCACTACTTCTCAATGTACAAGTATGCCCTTGATGCTCTTCTCATCAATGAGTACTCGTGCCTGGTCTCAAGGTGTTTGATATGGTACGATGAGAACAAAGGATGCATGATGACCGGTGCTGATGTTTTGGAGAAGAAAGGTCTTCATGAGAAGCAAAGGTGGACAAACATATATATCCTGTTTGGGTTCTTCGTGTTCTATCGTGTTCTTTGTTTGGTGGTTCTGATCAGAAGGGCTTCAAGATCTAAGAAATAA 1806 0.4557 MEGQSPPPPPSLPPPPPPHHKTYNITASSISYTKSTTTNATTFFFKTCTQSPPTYILRDVSFTAHPSQILAIVGPSGAGKSTLLDILAARTSPTHGTLLLNSSPLNPSSFRKLSAYVPQHDASLPLLTVSETFTFAARLLIPNTSQIPSVISSLLTDLRLSHLANTRLASGLSGGERRRVSIGLSLLHDPAVLFLDEPTSGLDSTSAFNVMQTLRSIAASRWCTVVLSIHQPSFKILSTIDRILLLSKGTVVHHGTVSSLQYFLLSNGFTVPPQLNALEYAMEILNQLTPQSLPPPPPPPPLHTSSTSPSNNDTKEIRYKSSRLHEIFTLYTRFWTIIYRTRQLLWTNTLEALVVGIVLGTIYIHVGFDKQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSHLIANTLVFLPYLLAIAMVYSVSVYFLVGLCATWQAFAYFVLVIWVVVLMANSFVLFLSSLAPNYVAGMSLVTIFLGAFFLFSGYFISKDSLPKYWLFMHYFSMYKYALDALLINEYSCLVSRCLIWYDENKGCMMTGADVLEKKGLHEKQRWTNIYILFGFFVFYRVLCLVVLIRRASRSKK* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00308 601 SMART AAA_5 66 250 IPR003593 GO:0016887
Eupl14g00308 601 Gene3D - 33 264 IPR027417 -
Eupl14g00308 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 586 - -
Eupl14g00308 601 ProSitePatterns ABC transporters family signature. 172 186 IPR017871 GO:0005524|GO:0016887
Eupl14g00308 601 Pfam ABC transporter 57 200 IPR003439 GO:0005524
Eupl14g00308 601 Pfam ABC-2 type transporter 230 289 IPR043926 GO:0140359
Eupl14g00308 601 MobiDBLite consensus disorder prediction 1 24 - -
Eupl14g00308 601 MobiDBLite consensus disorder prediction 1 21 - -
Eupl14g00308 601 Pfam ABC-2 type transporter 326 535 IPR013525 GO:0016020|GO:0140359
Eupl14g00308 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 273 IPR003439 GO:0005524
Eupl14g00308 601 MobiDBLite consensus disorder prediction 290 305 - -
Eupl14g00308 601 FunFam ATP-binding cassette transporter 46 266 - -
Eupl14g00308 601 MobiDBLite consensus disorder prediction 289 314 - -
Eupl14g00308 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 260 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00308 Eupl-Chr14 3799729 3801993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00308 52 260 Calmodulin-binding Proteins AT2G36910 28.125 2.53e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00308 K05681 - nnu:104611347 922.924