Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00306 ATGTCCAGCAGCGCCTCTGCTGCTGCCGCCGCCGCGACTGGTACAGCCGGCAGTGGTGCTGCTGGCGGTGGCGGAAGCTCCGGCTCCTTCCTTCAGAACTTTAGCAACCTCGGCCTCGGCTACGCCATTGCCATCGCTCTAGGGTTCCTCGTTCTCCTTTCAACCGTACTCCTCGCTTCTTACATCTGCTGCCGCGCCTCCCGCAACCGTTCCCGTTCTCCAAACCCTAACCCCTCGAACCCTAACGGTATCATACTTCCTCGCATAATCTTTGTTGCCGAAGACGACGACGATGAGAACGGCAGAGATGAGAACGTTGTTGCTGGGCTCGATCAGATGGTCATTAATTCGTACCCCAAGTTCCCATTTTGTAAATCGAAGGATCGAGGAAGTGATGGTGATTCAATTTGTTCGATCTGTCTCTGTGATTATAAGGATGGGGAGATGCTGAGGATGATGCCGGACTGTCGCCATTTCTTTCATCTCTATTGCGTTGATGCCTGGTTGAGGCTTAATGCATCTTGCCCTGTTTGTCGTAATTCGCCATTGCCGACTCCGTTGTCGACGCCGCTTTCAGAGCTTGTGCCCCTCTCGCATTATCCAGAGAATTGGAGGAGGTGA 621 0.5362 MSSSASAAAAAATGTAGSGAAGGGGSSGSFLQNFSNLGLGYAIAIALGFLVLLSTVLLASYICCRASRNRSRSPNPNPSNPNGIILPRIIFVAEDDDDENGRDENVVAGLDQMVINSYPKFPFCKSKDRGSDGDSICSICLCDYKDGEMLRMMPDCRHFFHLYCVDAWLRLNASCPVCRNSPLPTPLSTPLSELVPLSHYPENWRR* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00306 206 CDD RING-H2_EL5-like 136 179 - -
Eupl14g00306 206 SMART ring_2 137 178 IPR001841 -
Eupl14g00306 206 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Eupl14g00306 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 183 IPR013083 -
Eupl14g00306 206 Pfam Ring finger domain 137 179 IPR001841 -
Eupl14g00306 206 SUPERFAMILY RING/U-box 128 184 - -
Eupl14g00306 206 PANTHER RING-H2 FINGER PROTEIN ATL67 28 206 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00306 Eupl-Chr14 3730526 3731583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00306 27 201 C3H Transcription Factor Family AT5G06490 40.860 3.48e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00306 - - nnu:104600252 259.996