Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00262 ATGGGAACTAATGAAGCTGGGACAGTGTCCAAGTCCGAGAAAGCATCTTCACCTGCACAGGAACAGATCAACATTCCCGCGTATCCCAATTGGGCAGCTATCCAGGCATATTATGGGCCCGGAGTCACTCTTCCACCTCCATACTTCAACTCTGCAGTTACATCTGGTCATCCTCCTCACCCATATATGTGGGGCACACCTCAGCCTCTGATGCCACCTTATGGGGCGCCCTACGCAGCAATCTACTCACATGGAGGTGTTTATGCTCATCCTTCAGTTCCTCTTGGGTCACATTCACAAGGTAATGGGATTTCATCATCCCCTGCTGCATGCGAAGCCATGGCAGCAACTCCTTTGAGCATAGCAACACCCGCCAAATTATCAAGCAATAAAGATCGAGGCTTAATGAAGAAGTTGAAAGGGTTCGATGGGCTCGCAGTGTCAATAGGCAATGGCAATTCTGGGAGTGCTGCGGCATCACAGAGTGTGGACTGTGGGACAGAATTTTCCAGTGATGGAAGTGACGGGAATACGGCACCAGGGAGGGACCAAACACGGAGCAAAAGAAGCTGCGAGGGCATGCCATCCACAGGCAAGGATGGGAAAGTTGATGCACAGGCCAGTCCTGTACTCAGCGGAGAGACAAATGCAGCTTCTAGTGGGTCTTTGGGGATTACTGTAGCTTCTTCTAGTTTTGTGGGGAAACCAGTAGGAACTGTACCTTCTCCTAGTGGTAAAGCAAAGACCAGTGCTGCTGCTTTTCCTCCTGCACCTGGTGCAGAGATGCCAGCTCATGATGGTTTACCTTCCGAATTCTGGATACAGGGCGAGCGGGAGCTGAAACGAGAGAGGAGGAAACAGTCTAACAGAGAATCTGCTAGAAGGTCAAGGTTGAGGAAGCAGGTATGGGAAATATGTGAATGCACCTATTCTTTTATATATTTATCTCCATCTGTTCAAATCTTTCATTGTGTCTGTATGAGCACATCTGGGTCTATTTTTATTGTTATTTTATGCTTCCAGGCGGAGACTGAAGAACTCGCCGTGAAAGTTGAATCCTTGAATGCTGAGAATCTGGCCCTTAGGTCTGAAATTAATCAACTAACAGAGAATTCAGAGAAACTGAGGCTCGAAAATGCTGCATTAATGGAGAAACTGAAAAATGCACAGTTAGAACGGGCAGGAGAAATGGTTTCCAATGAGATGGAAGCACAGGCAACCCCACCCATCAGCACTGAGAACTTCTTGTCCAGAGTAGACAATTCAGGGCCTGTTACTAGAAGCACACAACGGGAGAGTGAGGCCCATGAAAAAAATTCTGGAGCCAAGCTGCATCAGCTCTTAGAATCAAGTCCCAGGGCCGATGCTGTGGCTGCAGGCTGA 1383 0.483 MGTNEAGTVSKSEKASSPAQEQINIPAYPNWAAIQAYYGPGVTLPPPYFNSAVTSGHPPHPYMWGTPQPLMPPYGAPYAAIYSHGGVYAHPSVPLGSHSQGNGISSSPAACEAMAATPLSIATPAKLSSNKDRGLMKKLKGFDGLAVSIGNGNSGSAAASQSVDCGTEFSSDGSDGNTAPGRDQTRSKRSCEGMPSTGKDGKVDAQASPVLSGETNAASSGSLGITVASSSFVGKPVGTVPSPSGKAKTSAAAFPPAPGAEMPAHDGLPSEFWIQGERELKRERRKQSNRESARRSRLRKQVWEICECTYSFIYLSPSVQIFHCVCMSTSGSIFIVILCFQAETEELAVKVESLNAENLALRSEINQLTENSEKLRLENAALMEKLKNAQLERAGEMVSNEMEAQATPPISTENFLSRVDNSGPVTRSTQRESEAHEKNSGAKLHQLLESSPRADAVAAG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00262 460 Pfam bZIP transcription factor 277 301 IPR004827 GO:0003700|GO:0006355
Eupl14g00262 460 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 429 IPR044827 GO:0003700|GO:0006355|GO:0043565
Eupl14g00262 460 CDD bZIP_plant_GBF1 282 370 IPR045314 GO:0003700|GO:0006355
Eupl14g00262 460 MobiDBLite consensus disorder prediction 239 269 - -
Eupl14g00262 460 MobiDBLite consensus disorder prediction 401 460 - -
Eupl14g00262 460 MobiDBLite consensus disorder prediction 153 184 - -
Eupl14g00262 460 MobiDBLite consensus disorder prediction 1 21 - -
Eupl14g00262 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Eupl14g00262 460 Coils Coil 351 392 - -
Eupl14g00262 460 Pfam Disordered region downstream of MFMR 132 244 - -
Eupl14g00262 460 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Eupl14g00262 460 MobiDBLite consensus disorder prediction 153 205 - -
Eupl14g00262 460 SMART brlzneu 277 381 IPR004827 GO:0003700|GO:0006355
Eupl14g00262 460 MobiDBLite consensus disorder prediction 404 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00262 Eupl-Chr14 3229247 3238104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00262 10 460 bZIP Transcription Factor Family AT2G46270 44.956 3.90e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl14g00262 MFMR_assoc 2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00262 K09060 - ming:122061923 503.442