Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00256 ATGGCCCCAAGTATTCTCCCTCCGATCAAATATACCGAGCACTCAATCTTTACTAAGAAGAATGTGAAGTCGTCTGCAAAATCGAGAAATGTATTCGGTCATCCGAGTACGGCAGAAATGAACTACGTTGGACCAAGAGTTGTACGGATCTCAGTTATTGACGGCGACGCGACGGACTCGTCTAGTGATGAAGAGAACGAGCTCTTCGGCCGTCACCGTGTGAAGAGATACGTTAACGAGATCACTATAGAAGCTCGTTCGATAGAAAAAGGTAAAGGTAGTGTTAACGGTCGTTCGAGGAAGAGATCTGTTAAATCAGGAGCATCAGAAACTCCGGCGAGTCGGCGGTCGTTGAAGCTCTCGAATTCAAATGGTAAGAAGTTTCGTGGAGTAAGGCAACGGCCATGGGGTAAATGGGCGGCTGAGATTCGAGATCCTTCTCGACGCGTACGACTTTGGCTAGGTACTTACGATACCGCCGAGGAAGCCGCGAAAGTTTATGACAATGCAGCGATTCAGTTACGCGGACCTGAAGCCTTGACGAACTTCTCGAATCAAGTAAAACCTAAACCGGAAATCAATCTGAAGGCACTTTCCGGTTACGACTCGATGGAAGAGTGTCACAATCTCTCTTCCCCAACCTCAGTTCTCCAATTCGGGTCTACTTCCAACGAGGAACCCGAACCCCAAAACCGGCGACAACCGGTTAAAGAAGTTAAAGAAGAACTCTGTTTATCGGAAAATTTCGGCGAGTTTTTGCCTCTCGATACGCCGGTTTTTTCCGATTTTTTTGACTTTCAAATTCAAACACCATCAGTGCCGGAGATCTTCGAGGAAACGAGCTTACCTGATAGATTTTTCAGTGAAGATTTCGGAGATATCTTTCTCGGTTCAAGTGACGATTTCGCGTCTTCGTTTTGGCAAGAAGACGACTATTTCCAAGAAATTGGAGATTTATTTGTCTCGGACCCTCTAGTAGTTCTTTGA 987 0.461 MAPSILPPIKYTEHSIFTKKNVKSSAKSRNVFGHPSTAEMNYVGPRVVRISVIDGDATDSSSDEENELFGRHRVKRYVNEITIEARSIEKGKGSVNGRSRKRSVKSGASETPASRRSLKLSNSNGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAKVYDNAAIQLRGPEALTNFSNQVKPKPEINLKALSGYDSMEECHNLSSPTSVLQFGSTSNEEPEPQNRRQPVKEVKEELCLSENFGEFLPLDTPVFSDFFDFQIQTPSVPEIFEETSLPDRFFSEDFGDIFLGSSDDFASSFWQEDDYFQEIGDLFVSDPLVVL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00256 328 MobiDBLite consensus disorder prediction 213 236 - -
Eupl14g00256 328 MobiDBLite consensus disorder prediction 100 128 - -
Eupl14g00256 328 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Eupl14g00256 328 Gene3D AP2/ERF domain 126 186 IPR036955 GO:0003700|GO:0006355
Eupl14g00256 328 MobiDBLite consensus disorder prediction 89 129 - -
Eupl14g00256 328 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Eupl14g00256 328 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Eupl14g00256 328 MobiDBLite consensus disorder prediction 213 229 - -
Eupl14g00256 328 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Eupl14g00256 328 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Eupl14g00256 328 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 45 232 - -
Eupl14g00256 328 SUPERFAMILY DNA-binding domain 127 185 IPR016177 GO:0003677
Eupl14g00256 328 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Eupl14g00256 328 CDD AP2 126 186 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00256 Eupl-Chr14 3152099 3153786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00256 6 327 AP2-EREBP Transcription Factor Family AT4G27950 40.456 4.58e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g00256 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00256 - - nnu:104600304 370.933