Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00248 ATGGTTTTATTATCCACGGAACCGAAACCTAGCAAAATAAACTCAAACAAAGATGGGAAAATCGGAATTTCTGAAAAAATTACCGATTTTCTGCGAGAATCAGAGATGGGTGACGATGGGTTTCGCCTAAAACGGTCGGAAATCGGGAATTTAAGCTCTCAAGAGCTGACTCTGAGCTATCTCTGCGATAATTCTAAAATGGGGTTTCAAGAGAAAGAGCTTGCAGGGAAGAATTTACTGACTTCTTTAGAGAAAGGGAGGTATTGTAAAGGAAAGGAAGTGATTTCGGATTCTCCCAACGAAGAGGACAGATGGGTAGAGAGGGATTTTTTGCAGTTGAGTGGGAGTAGTAGGGGAGGAGGAGGAGGAGGAGGAGGGCCGAAGAGAGAAATCGAAGAAGAAGAAATCGAAAGAGAGAAGAGGGAGAAGAAGCTGAAGCTAGAGACCCTTAATCTATCTTTAGCTTTGCCTGGTGCATCCCTCTCTCTTACCTCTTCGAACCCGCTGCCGAATCCCGACCCTCCTGTTATTCTGAAGTCGAGCAGGAGCATGCAGTCCTTGGCACCGTCGAACAACAATACGCGGACAGCGAGCTCCGATGACTTTACGGCCGCATCTCTCTCCTATTCATACTCTCACCCGTTTTCCCACAACCCCAGCTGCTCCCTCACACGAAACTCGACCGAGAATTATGAGTACTCGTGCGGCAGCCACCGAAGAGAGACTGACCAGATTTGGAATTGTGGGGAGGGGACTAATGGCTCCGTTCACAGCCGGTTCAAACCAGTTGGCGACGCGGTTAATTTGTCGAACCATGGTGGTTTCAGTTATCGGCCGATCAATAAGGATTCATTTAACGGTCTTCACAGAACAACCAGCTCTGAAAACTGTTCTTTCTTTCCGTCTGAACTACCAGCGAAGCCATGGAAAGATTCTCAATCAGTTGACTCGAGAGGAAGATCTTCTGGGCAAAAAAGGGGTTTTGAGAATTCAGATGGAGGAAGAGCGCATAAGCCAACGAAACCTGAGATGATTCTACGTGAAATTGTCTCCAAGTCTATTCCTGTCATGGCTCGAATATTTCAGGAGCTTACGGAAGATGTAATTGAATCCACAAAGACGTATTTGAAGAGTCTAATTGGGGTTCCTGATAAGAGAGAGGAGTTAACGGGTCTCCAGGACCGACTTGAGAGAAGATCCGACCTCACATTTGAGGCGCTCTCAAAGTCCCACAAGGCCCAATTGGAAATCTTGGTTGCAGTGAAGACGGGACTCGCAGACTACTTATCAGGGAAAAATCATCTCCCCATGGCTGAGCTGGTGGAGATATTCTTGTTGTTGAGGTGTCGGAATGTGAACTGCAAGAGTTTATTGCCTATTGAAGACTGTGACTGCAAGATATGCTCGACGAAGAAGGGCTTCTGTGGCGCCTGCATGTGTCCTGTGTGTTTGAACTTTGATTGTGCTAATAACACTTGCAGCTGGGTTGGTTGTGATGTTTGCTCCCACTGGTGCCATGCTGTTTGTGGCATCCAGAGTAATCTCATCAAGCCAGGCCCTAGCTTGAAGGGGCCAAAGGGGACCATGGAGATGCAATTCCATTGCCTCGGATGTGGGCATGCTTCTGAGATGTTTGGGTTTGTTAAGGATGTGTTTATGTGCTGTGCAAAAGATTGGGGTCTAGAAACCCTGACAAAGGAGCTTGATTGTGTCAGGAAGATCTTCAGGGGAAGTTTGGACTCCAAGGGCAAGGAGCTGCAGAGTAAGGCAGAGGAGATGTTTTCCAAGCTTGGGAATAAAAGCATTTCTACTTCGGAAGCTTGTAAAGTCATTCTTCAGTTTTTTAAGTATGGCGTCTCAGGCTTTTCTGGTTCAGGTAGCTCTTCCAAAGACTTGCCGGTGTCTCAAGTGAGCCAAGGGGGCGATGTGGACTCTCGTTCACCAGCCACTTCTCTCCCTCCAAAATATACCCCTTATAATATGAGCATTCCTAGTATGAGGCGGGATATGCTGACACAGAGAGACAGTGCTCATAAGATTGACCTCAAAGCCCTTATAAGTGATCAATCAGTCGAAGAGGATTTGCGGTCTGGGATTTTGACAAAGGAAGGGTTCAACAACCTGGAAACTGTCGTGCGGATCAAGGAAGCAGAAGCAAGGATGTTCCAGAGCAGAGCAGATGATGCACGAAGGGAGGCAGAGGAGTATCAGCTGATGGCCTGTGCGAAGAGTGAGAAGTTGGAGGAAGAGTATGCTAGCAAGCTTGCAAAACTGTGTTTGCAGGAGACAGAGGAGAGGCGGAGGAAGAAGCTTGAGGAGCTCAAGGTCTTGGAGAATTCCCACTGTGATTACTACAACATGAAGATGAGAATGCAAGCTGAGATTGCAGGCTTGTTGGAGAGGATGGAAGCAACAAAGCAGCAATGGGTGTAA 2433 0.4731 MVLLSTEPKPSKINSNKDGKIGISEKITDFLRESEMGDDGFRLKRSEIGNLSSQELTLSYLCDNSKMGFQEKELAGKNLLTSLEKGRYCKGKEVISDSPNEEDRWVERDFLQLSGSSRGGGGGGGGPKREIEEEEIEREKREKKLKLETLNLSLALPGASLSLTSSNPLPNPDPPVILKSSRSMQSLAPSNNNTRTASSDDFTAASLSYSYSHPFSHNPSCSLTRNSTENYEYSCGSHRRETDQIWNCGEGTNGSVHSRFKPVGDAVNLSNHGGFSYRPINKDSFNGLHRTTSSENCSFFPSELPAKPWKDSQSVDSRGRSSGQKRGFENSDGGRAHKPTKPEMILREIVSKSIPVMARIFQELTEDVIESTKTYLKSLIGVPDKREELTGLQDRLERRSDLTFEALSKSHKAQLEILVAVKTGLADYLSGKNHLPMAELVEIFLLLRCRNVNCKSLLPIEDCDCKICSTKKGFCGACMCPVCLNFDCANNTCSWVGCDVCSHWCHAVCGIQSNLIKPGPSLKGPKGTMEMQFHCLGCGHASEMFGFVKDVFMCCAKDWGLETLTKELDCVRKIFRGSLDSKGKELQSKAEEMFSKLGNKSISTSEACKVILQFFKYGVSGFSGSGSSSKDLPVSQVSQGGDVDSRSPATSLPPKYTPYNMSIPSMRRDMLTQRDSAHKIDLKALISDQSVEEDLRSGILTKEGFNNLETVVRIKEAEARMFQSRADDARREAEEYQLMACAKSEKLEEEYASKLAKLCLQETEERRRKKLEELKVLENSHCDYYNMKMRMQAEIAGLLERMEATKQQWV* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00248 810 Coils Coil 712 739 - -
Eupl14g00248 810 Pfam Coiled-coil region of Oberon 685 799 IPR032535 -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 178 199 - -
Eupl14g00248 810 Pfam PHD - plant homeodomain finger protein 449 573 IPR032881 -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 322 342 - -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 624 658 - -
Eupl14g00248 810 Coils Coil 760 780 - -
Eupl14g00248 810 Coils Coil 788 808 - -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 304 342 - -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 111 137 - -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 360 382 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 745 767 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 559 578 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 440 461 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 486 506 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 706 726 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 414 429 IPR004082 -
Eupl14g00248 810 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 399 414 IPR004082 -
Eupl14g00248 810 Coils Coil 129 153 - -
Eupl14g00248 810 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 128 809 IPR004082 -
Eupl14g00248 810 CDD PHD_OBE1_like 479 538 IPR047578 -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 160 199 - -
Eupl14g00248 810 MobiDBLite consensus disorder prediction 624 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00248 Eupl-Chr14 3070938 3077194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00248 443 597 PHD Gene Family AT5G57380 23.871 2.38e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00248 - - nnu:104585677 1021.54