Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00245 ATGGAAGGAATGGGGGACGAAGTGACTGAAGCATCAGAGGGTGCGCACCTCAAAAGGAAAGAGATCGATCCTTCCCTGAAACTGGATAGCTCTAATGTAATAGCCTCACCGGCAATGTTTATTTCAGCAAGCAATTGGCCCGAGAGCTCGGCCCAGTTGTTTACTGATACTTTAGAACGTAAGAGTGTAAACAGATGTGTAACTTCTGTTGCTGGATCTGAACCGCCGTGTACTAGCCCCTGCTCTATGAATGATGCCAGTGACATGGTTGAAGAGTTGACACTGACAAATTACAAAATTCCAAATTTATCCGTAGTTTGTAGCTCAAATAGTAGGGAAGGAATGCAGATTAGGCGGGGTCAATGGCAACATTTATATCATCTGGCAGATGGGTCGGGAAACAGGAGTTCACATGGAGATACTGTATCCAATGACAAGGAACCGGTTATGTTGGGTGGTAGGGAGGACATGGAAAATATATTTCTCCCTGAATATGGGGTTCAAAAGCCTCTGCCGTGTAAGCAATCCAATCAAGAAAGTGCCAAGGTCTCTGAACATTTAATCAATAGTGGCAACAATACCATGTCAAGCAATACCTTATCTCCAAGTGGGATCAGGACGAAGATTCTATCAGCGTCTGGCTTTCCTCAGTTTTTTGTTAAGAATAGTTTGAAAGGGAAGGGAATTGTATTTAGACACCCAGAAGCTCGTCATGGATTTGGTGTTGCAGGCATGGGCCAGACTAATGAGAAGGCTGCTTGTATTGCTAGGGTGGCTTCCAATGCATCAATGAATTCAAGTGCAAAAGCCAACGATATGTTGCCGCATAGTGTTGCTGTGGCTGGTGCCGATTCGTTTCATGACGGAATCAGCTTAAGAGAGTGGCTGAAACCAGGGTGCCGTAAAGTAAATAAACCTGAGAGCCTGCATATATTTAGGCAGATTGTGGAGCTGGTAGATCTCGCACATTCCAAACGAGTTACCTTGCAAGATATACGGCCGTCTTGTTTCAAGTTGTTGCCGTCAAATCTTGTTAAATATGTTGGTTCATTGGGCGCCCAGAGAGAGTTGTTAGAGAGTTTAATGGATCCAGATGTATCCTACTCGGAGCAACATTTGAGTGCAAAACGGTACTTGGAAGAGAGTGTGCCTGCATATGATAGTTTACGTTCAAAGCATCAAAAACTCGGAGAGAACATGAAATTCGGTAGACAACAGCGCCAATTTCCAGCTAGATCTGGCTTTAAGCATGAAACAGTTAAAGATGTCCCTATTAATAGTATTGGAACACAAAATTCTGGGAGGCATACCAGTGAAAGGCATAACTCCAATTCAGAACATAGGCCTCAAAACAAGTCTGGCAGCCCAGGTGTATCCAATACAGCTAGACAGCAGTTGACTTCTGCAAATGTTGAGTTGGAAGAGAAGTGGTATACTAGTCCAGAGGAGCTCAATGAGAGGGGGCCCACGTTTTCATCAAATGTATACTGTCTTGGGATTCTTCTATTTGAGCTGTTTTGCTGTTTCGAATTGTGGGAAATGCATGCCGCAGCAGTGTTGGATCTTCACAATCGGATTCTTCCTCCAAATTTTCTGTCAGAAAATCCCAAGGAGGCTGGTTTCTGTCTCTGGCTTCTTCACCCAGAACCTTCGTCACGGCCGACAACAAGGGAAATCCTACAATCTGAATTAATATGCGAATCTCGAGAGTTGGTGTCTGGAGATCAATCATCATTATCTGCTGATGAAGATCATGCTGAGTCGGAGCTATTGTTGCATTTTCTTGTATCTTTAAAGGAACAAAAGCAGAAGCAGGCCTCCAAGTTAGTTGAAGACATTGGATGCTTAGAAGCGGATATTGAGGAGGTTGAGAAAAGGCACTTAGTAAGAACAACCGGGGTTCTTTCGTGGAAACATAACGACTCCTTCAATACAAGAGAACCTTTACACTCAGAGGCACTCTCTAGATTATCCCCCATGCCAAATATGAACGAGTCCAGGTTGATGAGGAATATTCATCAGCTTGAAAATGCGTACTTCTCCATGAGATCCGAAATCCAGCTTCCAGATAATGATGCCATAACTCGCTTGGATAAAGATTTAATAAAGAACCGAGATAGATGGTCTGCTGTACAGAATGAGAATGAAGGGTGGGTTCGGAACCAGAAATCCGCTGATCGCCTTGGAGCCTTCTTTGATGGTCTATGCAAGTATGCTCGCTATAGTAAGTTTGAATTACGTGGGACATTAAGAAATGGGGATCTCCTCAACTCTGCAAATGTGATTTGTTCTTTGAGTTTTGACTGTGATGAGGACTACTTCGCTGCTGCTGGGGTATCAAAGAAAATTAAGATCTTCGAGTTCAATGCACTCTTGAATGATTCTGTTGATCTTCACTACCCAGTGATTGAGATGTTGAGTAAATCTAAGCTCAGCTGTGTTTGCTGGAACAACTACATAAAGAACTATTTGGCTTCAACTGATTATGATGGTGTGGTTCAGCTATGGGATGCAAGCACTGGTCAAGGGTTTTCTCAATACATGGAGCATGAAAAGAGAGCTTGGTCTGTTGACTTTTCTCATGTGAATCCCACAAAGTTAGCCAGTGGAAGTGATGATTGTACCGTGAAACTATGGAGCATTAACGAGAGAAAGTGTATCGACACGATAGGGAATCGTGCCAATGTCTGCTGTGTTCAGTTCTCTGCTCACTCCACTCATTTGTTGGCCTTCGGGTCTGCCGATTACAAGACCTATTGCTATGATCTAAGGCATACAAAAATCCCTTGGTGTACATTGGTCGGGCATGGAAAAGCTGTTAGCTATGTGAAGTTCTTAGACTCAGAGACACTTGTTTCTGCATCTACTGACAACACCCTAAAGCTTTGGGATCTCAACAAAACCAGTTCTAATGGGTTGTCCACTAATGCTTGCAGCTTAACCTTTAGAGGCCATACGAATGAAAAGAATTTTGTGGGCTTATCTGTCTCTGAAGGATATATCGCATGTGGTTCAGAAACGAACGAGGTTTATGCTTATTATAGATCTCTCCCTATGCCAATCACTTCTCACAAGTTTGGTTCCATTGATCCTATTTCTGGGCGAGAGACTGGCGACGACAGTGGACAGTTTGTCTCAAGTGTCTGTTGGAGAGGGAAATCAAACACGGTTGTCGCTGCCAATGCCAGTGGGAGTATAAAACTGTTGCAGATGGTGTAA 3219 0.4349 MEGMGDEVTEASEGAHLKRKEIDPSLKLDSSNVIASPAMFISASNWPESSAQLFTDTLERKSVNRCVTSVAGSEPPCTSPCSMNDASDMVEELTLTNYKIPNLSVVCSSNSREGMQIRRGQWQHLYHLADGSGNRSSHGDTVSNDKEPVMLGGREDMENIFLPEYGVQKPLPCKQSNQESAKVSEHLINSGNNTMSSNTLSPSGIRTKILSASGFPQFFVKNSLKGKGIVFRHPEARHGFGVAGMGQTNEKAACIARVASNASMNSSAKANDMLPHSVAVAGADSFHDGISLREWLKPGCRKVNKPESLHIFRQIVELVDLAHSKRVTLQDIRPSCFKLLPSNLVKYVGSLGAQRELLESLMDPDVSYSEQHLSAKRYLEESVPAYDSLRSKHQKLGENMKFGRQQRQFPARSGFKHETVKDVPINSIGTQNSGRHTSERHNSNSEHRPQNKSGSPGVSNTARQQLTSANVELEEKWYTSPEELNERGPTFSSNVYCLGILLFELFCCFELWEMHAAAVLDLHNRILPPNFLSENPKEAGFCLWLLHPEPSSRPTTREILQSELICESRELVSGDQSSLSADEDHAESELLLHFLVSLKEQKQKQASKLVEDIGCLEADIEEVEKRHLVRTTGVLSWKHNDSFNTREPLHSEALSRLSPMPNMNESRLMRNIHQLENAYFSMRSEIQLPDNDAITRLDKDLIKNRDRWSAVQNENEGWVRNQKSADRLGAFFDGLCKYARYSKFELRGTLRNGDLLNSANVICSLSFDCDEDYFAAAGVSKKIKIFEFNALLNDSVDLHYPVIEMLSKSKLSCVCWNNYIKNYLASTDYDGVVQLWDASTGQGFSQYMEHEKRAWSVDFSHVNPTKLASGSDDCTVKLWSINERKCIDTIGNRANVCCVQFSAHSTHLLAFGSADYKTYCYDLRHTKIPWCTLVGHGKAVSYVKFLDSETLVSASTDNTLKLWDLNKTSSNGLSTNACSLTFRGHTNEKNFVGLSVSEGYIACGSETNEVYAYYRSLPMPITSHKFGSIDPISGRETGDDSGQFVSSVCWRGKSNTVVAANASGSIKLLQMV* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00245 1072 SMART serkin_6 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00245 1072 Coils Coil 599 626 - -
Eupl14g00245 1072 PRINTS G protein beta WD-40 repeat signature 824 838 IPR020472 -
Eupl14g00245 1072 PRINTS G protein beta WD-40 repeat signature 951 965 IPR020472 -
Eupl14g00245 1072 PRINTS G protein beta WD-40 repeat signature 867 881 IPR020472 -
Eupl14g00245 1072 ProSiteProfiles Trp-Asp (WD) repeats profile. 847 889 IPR001680 GO:0005515
Eupl14g00245 1072 PANTHER PROTEIN SPA1-RELATED 2 10 1072 IPR044630 GO:0009640
Eupl14g00245 1072 ProSitePatterns Trp-Asp (WD) repeats signature. 951 965 IPR019775 -
Eupl14g00245 1072 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 933 966 - -
Eupl14g00245 1072 Gene3D Transferase(Phosphotransferase) domain 1 289 571 - -
Eupl14g00245 1072 Gene3D - 731 1072 IPR015943 GO:0005515
Eupl14g00245 1072 FunFam E3 ubiquitin-protein ligase RFWD2 isoform X1 730 1072 - -
Eupl14g00245 1072 MobiDBLite consensus disorder prediction 424 438 - -
Eupl14g00245 1072 SMART WD40_4 975 1014 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 799 837 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 883 922 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 926 964 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 752 787 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 1031 1070 IPR001680 GO:0005515
Eupl14g00245 1072 SMART WD40_4 840 880 IPR001680 GO:0005515
Eupl14g00245 1072 MobiDBLite consensus disorder prediction 448 462 - -
Eupl14g00245 1072 ProSiteProfiles Trp-Asp (WD) repeats profile. 933 966 IPR001680 GO:0005515
Eupl14g00245 1072 SUPERFAMILY Protein kinase-like (PK-like) 286 567 IPR011009 -
Eupl14g00245 1072 SUPERFAMILY WD40 repeat-like 759 1069 IPR036322 GO:0005515
Eupl14g00245 1072 MobiDBLite consensus disorder prediction 420 462 - -
Eupl14g00245 1072 Pfam WD domain, G-beta repeat 850 880 IPR001680 GO:0005515
Eupl14g00245 1072 Pfam WD domain, G-beta repeat 932 964 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00245 Eupl-Chr14 3036769 3053243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00245 800 965 Miscellaneous Gene Families AT5G08390 28.402 5.17e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Eupl14g00245 WD40 0.0089 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00245 K16240 - nnu:104603953 1441.79