Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl14g00245 | ATGGAAGGAATGGGGGACGAAGTGACTGAAGCATCAGAGGGTGCGCACCTCAAAAGGAAAGAGATCGATCCTTCCCTGAAACTGGATAGCTCTAATGTAATAGCCTCACCGGCAATGTTTATTTCAGCAAGCAATTGGCCCGAGAGCTCGGCCCAGTTGTTTACTGATACTTTAGAACGTAAGAGTGTAAACAGATGTGTAACTTCTGTTGCTGGATCTGAACCGCCGTGTACTAGCCCCTGCTCTATGAATGATGCCAGTGACATGGTTGAAGAGTTGACACTGACAAATTACAAAATTCCAAATTTATCCGTAGTTTGTAGCTCAAATAGTAGGGAAGGAATGCAGATTAGGCGGGGTCAATGGCAACATTTATATCATCTGGCAGATGGGTCGGGAAACAGGAGTTCACATGGAGATACTGTATCCAATGACAAGGAACCGGTTATGTTGGGTGGTAGGGAGGACATGGAAAATATATTTCTCCCTGAATATGGGGTTCAAAAGCCTCTGCCGTGTAAGCAATCCAATCAAGAAAGTGCCAAGGTCTCTGAACATTTAATCAATAGTGGCAACAATACCATGTCAAGCAATACCTTATCTCCAAGTGGGATCAGGACGAAGATTCTATCAGCGTCTGGCTTTCCTCAGTTTTTTGTTAAGAATAGTTTGAAAGGGAAGGGAATTGTATTTAGACACCCAGAAGCTCGTCATGGATTTGGTGTTGCAGGCATGGGCCAGACTAATGAGAAGGCTGCTTGTATTGCTAGGGTGGCTTCCAATGCATCAATGAATTCAAGTGCAAAAGCCAACGATATGTTGCCGCATAGTGTTGCTGTGGCTGGTGCCGATTCGTTTCATGACGGAATCAGCTTAAGAGAGTGGCTGAAACCAGGGTGCCGTAAAGTAAATAAACCTGAGAGCCTGCATATATTTAGGCAGATTGTGGAGCTGGTAGATCTCGCACATTCCAAACGAGTTACCTTGCAAGATATACGGCCGTCTTGTTTCAAGTTGTTGCCGTCAAATCTTGTTAAATATGTTGGTTCATTGGGCGCCCAGAGAGAGTTGTTAGAGAGTTTAATGGATCCAGATGTATCCTACTCGGAGCAACATTTGAGTGCAAAACGGTACTTGGAAGAGAGTGTGCCTGCATATGATAGTTTACGTTCAAAGCATCAAAAACTCGGAGAGAACATGAAATTCGGTAGACAACAGCGCCAATTTCCAGCTAGATCTGGCTTTAAGCATGAAACAGTTAAAGATGTCCCTATTAATAGTATTGGAACACAAAATTCTGGGAGGCATACCAGTGAAAGGCATAACTCCAATTCAGAACATAGGCCTCAAAACAAGTCTGGCAGCCCAGGTGTATCCAATACAGCTAGACAGCAGTTGACTTCTGCAAATGTTGAGTTGGAAGAGAAGTGGTATACTAGTCCAGAGGAGCTCAATGAGAGGGGGCCCACGTTTTCATCAAATGTATACTGTCTTGGGATTCTTCTATTTGAGCTGTTTTGCTGTTTCGAATTGTGGGAAATGCATGCCGCAGCAGTGTTGGATCTTCACAATCGGATTCTTCCTCCAAATTTTCTGTCAGAAAATCCCAAGGAGGCTGGTTTCTGTCTCTGGCTTCTTCACCCAGAACCTTCGTCACGGCCGACAACAAGGGAAATCCTACAATCTGAATTAATATGCGAATCTCGAGAGTTGGTGTCTGGAGATCAATCATCATTATCTGCTGATGAAGATCATGCTGAGTCGGAGCTATTGTTGCATTTTCTTGTATCTTTAAAGGAACAAAAGCAGAAGCAGGCCTCCAAGTTAGTTGAAGACATTGGATGCTTAGAAGCGGATATTGAGGAGGTTGAGAAAAGGCACTTAGTAAGAACAACCGGGGTTCTTTCGTGGAAACATAACGACTCCTTCAATACAAGAGAACCTTTACACTCAGAGGCACTCTCTAGATTATCCCCCATGCCAAATATGAACGAGTCCAGGTTGATGAGGAATATTCATCAGCTTGAAAATGCGTACTTCTCCATGAGATCCGAAATCCAGCTTCCAGATAATGATGCCATAACTCGCTTGGATAAAGATTTAATAAAGAACCGAGATAGATGGTCTGCTGTACAGAATGAGAATGAAGGGTGGGTTCGGAACCAGAAATCCGCTGATCGCCTTGGAGCCTTCTTTGATGGTCTATGCAAGTATGCTCGCTATAGTAAGTTTGAATTACGTGGGACATTAAGAAATGGGGATCTCCTCAACTCTGCAAATGTGATTTGTTCTTTGAGTTTTGACTGTGATGAGGACTACTTCGCTGCTGCTGGGGTATCAAAGAAAATTAAGATCTTCGAGTTCAATGCACTCTTGAATGATTCTGTTGATCTTCACTACCCAGTGATTGAGATGTTGAGTAAATCTAAGCTCAGCTGTGTTTGCTGGAACAACTACATAAAGAACTATTTGGCTTCAACTGATTATGATGGTGTGGTTCAGCTATGGGATGCAAGCACTGGTCAAGGGTTTTCTCAATACATGGAGCATGAAAAGAGAGCTTGGTCTGTTGACTTTTCTCATGTGAATCCCACAAAGTTAGCCAGTGGAAGTGATGATTGTACCGTGAAACTATGGAGCATTAACGAGAGAAAGTGTATCGACACGATAGGGAATCGTGCCAATGTCTGCTGTGTTCAGTTCTCTGCTCACTCCACTCATTTGTTGGCCTTCGGGTCTGCCGATTACAAGACCTATTGCTATGATCTAAGGCATACAAAAATCCCTTGGTGTACATTGGTCGGGCATGGAAAAGCTGTTAGCTATGTGAAGTTCTTAGACTCAGAGACACTTGTTTCTGCATCTACTGACAACACCCTAAAGCTTTGGGATCTCAACAAAACCAGTTCTAATGGGTTGTCCACTAATGCTTGCAGCTTAACCTTTAGAGGCCATACGAATGAAAAGAATTTTGTGGGCTTATCTGTCTCTGAAGGATATATCGCATGTGGTTCAGAAACGAACGAGGTTTATGCTTATTATAGATCTCTCCCTATGCCAATCACTTCTCACAAGTTTGGTTCCATTGATCCTATTTCTGGGCGAGAGACTGGCGACGACAGTGGACAGTTTGTCTCAAGTGTCTGTTGGAGAGGGAAATCAAACACGGTTGTCGCTGCCAATGCCAGTGGGAGTATAAAACTGTTGCAGATGGTGTAA | 3219 | 0.4349 | MEGMGDEVTEASEGAHLKRKEIDPSLKLDSSNVIASPAMFISASNWPESSAQLFTDTLERKSVNRCVTSVAGSEPPCTSPCSMNDASDMVEELTLTNYKIPNLSVVCSSNSREGMQIRRGQWQHLYHLADGSGNRSSHGDTVSNDKEPVMLGGREDMENIFLPEYGVQKPLPCKQSNQESAKVSEHLINSGNNTMSSNTLSPSGIRTKILSASGFPQFFVKNSLKGKGIVFRHPEARHGFGVAGMGQTNEKAACIARVASNASMNSSAKANDMLPHSVAVAGADSFHDGISLREWLKPGCRKVNKPESLHIFRQIVELVDLAHSKRVTLQDIRPSCFKLLPSNLVKYVGSLGAQRELLESLMDPDVSYSEQHLSAKRYLEESVPAYDSLRSKHQKLGENMKFGRQQRQFPARSGFKHETVKDVPINSIGTQNSGRHTSERHNSNSEHRPQNKSGSPGVSNTARQQLTSANVELEEKWYTSPEELNERGPTFSSNVYCLGILLFELFCCFELWEMHAAAVLDLHNRILPPNFLSENPKEAGFCLWLLHPEPSSRPTTREILQSELICESRELVSGDQSSLSADEDHAESELLLHFLVSLKEQKQKQASKLVEDIGCLEADIEEVEKRHLVRTTGVLSWKHNDSFNTREPLHSEALSRLSPMPNMNESRLMRNIHQLENAYFSMRSEIQLPDNDAITRLDKDLIKNRDRWSAVQNENEGWVRNQKSADRLGAFFDGLCKYARYSKFELRGTLRNGDLLNSANVICSLSFDCDEDYFAAAGVSKKIKIFEFNALLNDSVDLHYPVIEMLSKSKLSCVCWNNYIKNYLASTDYDGVVQLWDASTGQGFSQYMEHEKRAWSVDFSHVNPTKLASGSDDCTVKLWSINERKCIDTIGNRANVCCVQFSAHSTHLLAFGSADYKTYCYDLRHTKIPWCTLVGHGKAVSYVKFLDSETLVSASTDNTLKLWDLNKTSSNGLSTNACSLTFRGHTNEKNFVGLSVSEGYIACGSETNEVYAYYRSLPMPITSHKFGSIDPISGRETGDDSGQFVSSVCWRGKSNTVVAANASGSIKLLQMV* | 1073 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl14g00245 | 1072 | SMART | serkin_6 | 229 | 565 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl14g00245 | 1072 | Coils | Coil | 599 | 626 | - | - | |
Eupl14g00245 | 1072 | PRINTS | G protein beta WD-40 repeat signature | 824 | 838 | IPR020472 | - | |
Eupl14g00245 | 1072 | PRINTS | G protein beta WD-40 repeat signature | 951 | 965 | IPR020472 | - | |
Eupl14g00245 | 1072 | PRINTS | G protein beta WD-40 repeat signature | 867 | 881 | IPR020472 | - | |
Eupl14g00245 | 1072 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 847 | 889 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | PANTHER | PROTEIN SPA1-RELATED 2 | 10 | 1072 | IPR044630 | GO:0009640 | |
Eupl14g00245 | 1072 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 951 | 965 | IPR019775 | - | |
Eupl14g00245 | 1072 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 933 | 966 | - | - | |
Eupl14g00245 | 1072 | Gene3D | Transferase(Phosphotransferase) domain 1 | 289 | 571 | - | - | |
Eupl14g00245 | 1072 | Gene3D | - | 731 | 1072 | IPR015943 | GO:0005515 | |
Eupl14g00245 | 1072 | FunFam | E3 ubiquitin-protein ligase RFWD2 isoform X1 | 730 | 1072 | - | - | |
Eupl14g00245 | 1072 | MobiDBLite | consensus disorder prediction | 424 | 438 | - | - | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 975 | 1014 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 799 | 837 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 883 | 922 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 926 | 964 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 752 | 787 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 1031 | 1070 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SMART | WD40_4 | 840 | 880 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | MobiDBLite | consensus disorder prediction | 448 | 462 | - | - | |
Eupl14g00245 | 1072 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 933 | 966 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | SUPERFAMILY | Protein kinase-like (PK-like) | 286 | 567 | IPR011009 | - | |
Eupl14g00245 | 1072 | SUPERFAMILY | WD40 repeat-like | 759 | 1069 | IPR036322 | GO:0005515 | |
Eupl14g00245 | 1072 | MobiDBLite | consensus disorder prediction | 420 | 462 | - | - | |
Eupl14g00245 | 1072 | Pfam | WD domain, G-beta repeat | 850 | 880 | IPR001680 | GO:0005515 | |
Eupl14g00245 | 1072 | Pfam | WD domain, G-beta repeat | 932 | 964 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl14g00245 | Eupl-Chr14 | 3036769 | 3053243 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl14g00245 | 800 | 965 | Miscellaneous Gene Families | AT5G08390 | 28.402 | 5.17e-09 | 58.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | PEK_PEK | Eupl14g00245 | WD40 | 0.0089 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl14g00245 | K16240 | - | nnu:104603953 | 1441.79 |