Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00236 ATGGCGGATATTGTTGCCGAGATTCCCATTGATGCCAACCCTGTTCCTGCAAAGAAAGGAAAGAACAGAAAGCCATTGAAGCCGAAGAACCCATCTGCAAACGAGGCCAACATCTTGGCCGGAAAGATTTCTCAACCATCTCCTTCCCCTCTCGGAGATGTTGGAAAGGAGAACCAAAAAATCCTCTCGTCGCCCAAGAAAAATAAAGCTGCTCCAAAGAAGAAAGATTCCAAGAAATCTTTCGAAAAAGAGTTGCAAGAAATGCAAGAGAAGCTAGAACATCTGCGCCTCGAGAAGGAGAAGACTGAAGAGCTCTTGAAGGCTCGGGATGAGATGTTGAAGCAGAAAGAGGAAGAACTTGAAAACCGCGGCAGAGAGCAGGAGAAGCTTCAGTTCGATTTGAAGAAGTTGCAGAAGTTGAAGGAGTTCAAACCCACCGTGAGCTTCCCTCTCGTTCAATCTCTGAGAGAGAAAGAGCAAGAACAGAAAGAGAAGAACAAGAAGAAGAAGAAGACGTGCCCCGAAAAGAAGAAACCATCTCCAGCTTATATCCTCTGGTGTAGAGATCAATGGAATGAGGTCAAGAAAGAGAACCCAGATGCAGAGTTCAAAGAAATCTCAAACATAATGGGAGCAAAATGGAAGAATCTAAGTGCAGAAGAGAAGAAACCCTATGAGGAAAAATACCAGGCTGATAAAGAAGCTTATCTACAGATCGTCGGAAAGGAGAAACGCGAGAACGAAGCAATGAAGCTCTTTGAGGAGGATCAGAAACAGAAGACGGCAATGGAGTTGCTCGGACAGTATCTCCAGTTCAAACAGGAAGCAGATAAAGAGACCAAGAAGACCAAGAAGACCAAGAAAGAAAAGGATCCACTAAAACCAAAGCAGCCTATATCAGCTTTCTTCCTGTTCTCAAAGGAGCGACGGGTAGCTCTGCTTCAAGAGAACAAGAATGTTTTGGAGATTGCTAAGATCGCAGGAGAGGAATGGAAGAACATGACTGAAGAACAGCGAGGACCATACCAAGAGATTGCAAAGAAACAAAAGGAAAAGTATCTGCAAGAAATAGAACTCTACAAGCAGAATAGGGATGAGGAAGCTGCAACTCATCAAAGGGAAGAGGAGGAACATATGAAAATTCAGAAACAGGAGGCCCTGCAACTGCTAAAGAAGAAGAAGAAAACAGAAACTATAATCAAGAAAACGAAAGAGAACCGCCAGAAGAAAAAGAAGCAGAAGGATGAACAGAACACCGACCCTAACAAACCGAAGAAGCCTGCCTCTTCATTTCTTCTGTTCAGCAAAGAGACAAGGAACAACTTGCTGCAGGAAAGACCAGGCATCAACAACTCTACCCTTAATGCTCTGATTTCAGTAAAATGGAAGGAATTGAATGAAGTCGAGAAAAAAATCTGGAATGATAAAGCGGCACGAGCCATGGAGGCATACAAGAAGGAATTGGAAGAGTACAAAAAATCTATGGTGGCTATGGATAATAATCCACAGCCATGA 1515 0.4337 MADIVAEIPIDANPVPAKKGKNRKPLKPKNPSANEANILAGKISQPSPSPLGDVGKENQKILSSPKKNKAAPKKKDSKKSFEKELQEMQEKLEHLRLEKEKTEELLKARDEMLKQKEEELENRGREQEKLQFDLKKLQKLKEFKPTVSFPLVQSLREKEQEQKEKNKKKKKTCPEKKKPSPAYILWCRDQWNEVKKENPDAEFKEISNIMGAKWKNLSAEEKKPYEEKYQADKEAYLQIVGKEKRENEAMKLFEEDQKQKTAMELLGQYLQFKQEADKETKKTKKTKKEKDPLKPKQPISAFFLFSKERRVALLQENKNVLEIAKIAGEEWKNMTEEQRGPYQEIAKKQKEKYLQEIELYKQNRDEEAATHQREEEEHMKIQKQEALQLLKKKKKTETIIKKTKENRQKKKKQKDEQNTDPNKPKKPASSFLLFSKETRNNLLQERPGINNSTLNALISVKWKELNEVEKKIWNDKAARAMEAYKKELEEYKKSMVAMDNNPQP* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00236 504 Coils Coil 151 172 - -
Eupl14g00236 504 MobiDBLite consensus disorder prediction 151 178 - -
Eupl14g00236 504 CDD HMG-box_AtHMGB6-like_rpt1 179 244 - -
Eupl14g00236 504 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 7 500 IPR044601 GO:0003677
Eupl14g00236 504 MobiDBLite consensus disorder prediction 1 84 - -
Eupl14g00236 504 Coils Coil 474 501 - -
Eupl14g00236 504 Pfam HMG (high mobility group) box 295 361 IPR009071 -
Eupl14g00236 504 Pfam HMG (high mobility group) box 424 492 IPR009071 -
Eupl14g00236 504 Pfam HMG (high mobility group) box 177 237 IPR009071 -
Eupl14g00236 504 Gene3D High mobility group box domain 174 243 IPR036910 -
Eupl14g00236 504 Coils Coil 343 420 - -
Eupl14g00236 504 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 176 244 IPR009071 -
Eupl14g00236 504 SMART hmgende2 423 493 IPR009071 -
Eupl14g00236 504 SMART hmgende2 175 245 IPR009071 -
Eupl14g00236 504 SMART hmgende2 294 362 IPR009071 -
Eupl14g00236 504 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 295 361 IPR009071 -
Eupl14g00236 504 SUPERFAMILY HMG-box 163 238 IPR036910 -
Eupl14g00236 504 SUPERFAMILY HMG-box 282 370 IPR036910 -
Eupl14g00236 504 Gene3D High mobility group box domain 391 501 IPR036910 -
Eupl14g00236 504 Gene3D High mobility group box domain 278 377 IPR036910 -
Eupl14g00236 504 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 424 492 IPR009071 -
Eupl14g00236 504 Coils Coil 71 133 - -
Eupl14g00236 504 SUPERFAMILY HMG-box 419 497 IPR036910 -
Eupl14g00236 504 MobiDBLite consensus disorder prediction 363 439 - -
Eupl14g00236 504 MobiDBLite consensus disorder prediction 363 422 - -
Eupl14g00236 504 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00236 Eupl-Chr14 2908152 2911331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Eupl14g00236 HMG_box 3.2e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00236 K09273 - nnu:104603963 607.06