Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00231 ATGGGTGATAGCTTGTCTGAACTTTTCGAAGACAACGATTTTGATGACACCAGCTTCACCGGAGAAGTTTCACCTGAAGATCTCTTCAGTATTTTGGAAACCCTAGAGAATGATGCTCCAGAGCTTACTCCATTTACACCATTAGATGAAACAGTTTTTAGCCCAAAAGGCGGCGACGACGACGACAAGAAGAGATTGGTTTCTCAGAAATCTACTTCTTTGAGACACGACTCAGAGACTGAAGTGGAAGCTTCACCAAATTGCAAGAAACAAAAGCTCACCGTGATACCTTCTTCTGAGGAAGTAGTCTCAGATGGGCAACAACGGATTTCGCACATAACGGTCGAGCGAAACCGGAGAAAGCAGATGAACGAACACTTATCAGTCTTGCGCTCATTGATGCCTTGCTTCTATGTCAAAAGAGGAGATCAAGCATCGATAATAGGAGGAGTTGTGGATTACATCAAGGAATTACAGCAAGTTCTACAGTCACTTGAAGCAAAGAAACAAAGGAAAGTTTATAGTGAAGTTTTAAGTCCTAGACTTGTTTCATCAAGTCCCAGACCCTCAGCATTAAGCCCAAGAAAACCACCTCTAAGTCCTAGGGTAACCTTGCCCATAAGTCCTAGGACCCCCCAACCAACTAGTCCTTACAAGCCTAGGATGCAACAAGGTTACCTATCGCCAACAATAAATAATTCACATGAACCTTGTTCATCGTCTTCCTCCCTCTTGGACAATGTTAAGGAGCTTGCAGCTAACTCAAAATCTTCAATTGCTGAAGTAGAGGTGAAGTTTTCGGGCCCAAATGTTCTTTTAAAAACGATATCACCTCGAATCCCTGGCCAAGCTTTGAAGATAATTGCCGTCGTCGAAGCCCTCTCACTTGAAATTCTTCATGTGAGCATCAGCATCATCGACGACACCATGTTTAACTCATTCACTATAAAGATTGGAATTGAATGCCAACTTAGTGCGGAGGAACTCGCACATGAAATTCAGCAAACATTCTGCTAA 1017 0.4287 MGDSLSELFEDNDFDDTSFTGEVSPEDLFSILETLENDAPELTPFTPLDETVFSPKGGDDDDKKRLVSQKSTSLRHDSETEVEASPNCKKQKLTVIPSSEEVVSDGQQRISHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKVYSEVLSPRLVSSSPRPSALSPRKPPLSPRVTLPISPRTPQPTSPYKPRMQQGYLSPTINNSHEPCSSSSSLLDNVKELAANSKSSIAEVEVKFSGPNVLLKTISPRIPGQALKIIAVVEALSLEILHVSISIIDDTMFNSFTIKIGIECQLSAEELAHEIQQTFC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00231 338 SMART finulus 113 164 IPR011598 GO:0046983
Eupl14g00231 338 CDD bHLH_AtFAMA_like 110 181 - -
Eupl14g00231 338 MobiDBLite consensus disorder prediction 1 17 - -
Eupl14g00231 338 MobiDBLite consensus disorder prediction 1 22 - -
Eupl14g00231 338 PANTHER TRANSCRIPTION FACTOR FAMA 5 337 IPR044283 GO:0003700|GO:0010052
Eupl14g00231 338 MobiDBLite consensus disorder prediction 191 216 - -
Eupl14g00231 338 Pfam Helix-loop-helix DNA-binding domain 108 159 IPR011598 GO:0046983
Eupl14g00231 338 FunFam Transcription factor SPEECHLESS 99 173 - -
Eupl14g00231 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 177 IPR036638 GO:0046983
Eupl14g00231 338 Gene3D - 99 172 IPR036638 GO:0046983
Eupl14g00231 338 MobiDBLite consensus disorder prediction 179 220 - -
Eupl14g00231 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 158 IPR011598 GO:0046983
Eupl14g00231 338 MobiDBLite consensus disorder prediction 39 84 - -
Eupl14g00231 338 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00231 Eupl-Chr14 2843303 2846073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00231 1 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 48.901 2.58e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g00231 HLH 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00231 K20558 - msin:131241312 443.736