Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00227 ATGGAACACGCTGGGGATTGGGAGCAGAAGCCTTTGATCAATGAGCTAACACAAGGGAGGGAGCTGGTGAACCAGCTTCGAATCCATCTAGACCCATCATCTTCGAACGGAGAATTGCTAATCGAAAAGTTACTATGTTCCTTCAATAAGGCTCTTGTGATGGTTAATTGGAGTGGATCAGAGGGAGAGCCACAGCCGACGGGACCGAACACTGGCATGTCGGAATCCCAGCGTTCCGTCAGCGGAAGCCCACGGAGCGATGATTCTGACCGCCGAGATATATCAAAGAAGAGGAAGATACTACCCCGATGGACTGAACAAGTGCGTGTTAGCTCTGGGATGGGGCTTGAAGGGCCTCTTGAGGATGGCTATAGTTGGAGAAAGTATGGGCAGAAAGACATCCTTGGAGCCAAATATCCAAGAGGCTATTATCGATGCACTCATCGTAATGTTCAAGGGTGTCCGGCTACAAAGCAAGTCCAGAGATCGGACGACAACCCGTTGGTCTTCGACATCACATACCGAGGAAGGCACACTTGCATCCAAGCATCCCATCTAGTTCGGGCGTTACAATCACCAGAAAAACAAGATCAAATTAAACAAAACCAAGATCAACAAGAACTAAAGAAGCCTAAGCAATCTGAAGAGATACTCTTGAACTTCCGAACCGGCCTCACGGTCAAAACTGAAGACTTAGACAGCCGAGAGCTGACGTCTTCCTTCTCCTTCCCTTCTACATCAGTCGGGTGCAACAAGCCAGAAAATCATATCTTCTCGTCGTCGTCGACGCTCGATAACAACTTCATGGGTAGTTTTTCTCCTCCGTTTATATCCCCAGCAACATCCGAATCAACCTACTTCTCACCATTCCGGATGAACAGTTATGGAGGTGGACCGAATTTACAAACTTCGGAATCCGATCTCACTGAGATATTCTCAGCAGCTACTTCGGCCACGAATTCTCCAATTGTGGACATAGATTTCACACTTGATCCAGTGGAATTCGACCCGAATTTCCCATTCGACACTCCGGGCTTATTCAATTAA 1047 0.4766 MEHAGDWEQKPLINELTQGRELVNQLRIHLDPSSSNGELLIEKLLCSFNKALVMVNWSGSEGEPQPTGPNTGMSESQRSVSGSPRSDDSDRRDISKKRKILPRWTEQVRVSSGMGLEGPLEDGYSWRKYGQKDILGAKYPRGYYRCTHRNVQGCPATKQVQRSDDNPLVFDITYRGRHTCIQASHLVRALQSPEKQDQIKQNQDQQELKKPKQSEEILLNFRTGLTVKTEDLDSRELTSSFSFPSTSVGCNKPENHIFSSSSTLDNNFMGSFSPPFISPATSESTYFSPFRMNSYGGGPNLQTSESDLTEIFSAATSATNSPIVDIDFTLDPVEFDPNFPFDTPGLFN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00227 348 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl14g00227 348 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl14g00227 348 MobiDBLite consensus disorder prediction 60 83 - -
Eupl14g00227 348 MobiDBLite consensus disorder prediction 192 213 - -
Eupl14g00227 348 SUPERFAMILY WRKY DNA-binding domain 119 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl14g00227 348 MobiDBLite consensus disorder prediction 59 98 - -
Eupl14g00227 348 Pfam WRKY DNA -binding domain 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl14g00227 348 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 289 IPR044810 GO:0003700
Eupl14g00227 348 Gene3D WRKY domain 105 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl14g00227 348 FunFam WRKY transcription factor 53 106 183 - -
Eupl14g00227 348 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00227 Eupl-Chr14 2809295 2816214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00227 6 340 WRKY Transcription Factor Family AT4G11070 37.249 6.18e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl14g00227 WRKY 6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00227 - - tss:122664117 434.491