Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00225 ATGGATAAACGACGACGGAAGCAACCCAAGACTTCCAATTCTGAGTCTGAAGAGGTGAGTAGTATTGAGTGGGAATTCATAAACATGACTGAACAAGAAGAAGATCTCATCCATAGGATGTATAAACTCGTTGGAGACAGGTGGGCTTTAATAGCAGGTCGGCTACCGGGCCGGAAACCCGAAGAAATAGAGAGGTTTTGGATAATGAGACATGGTGAAGGGTTCGCCGGGAGAAGAAAAGAAGAGCCTGAGAGCAAAAATTGA 264 0.4508 MDKRRRKQPKTSNSESEEVSSIEWEFINMTEQEEDLIHRMYKLVGDRWALIAGRLPGRKPEEIERFWIMRHGEGFAGRRKEEPESKN* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00225 87 SMART sant 25 73 IPR001005 -
Eupl14g00225 87 SUPERFAMILY Homeodomain-like 30 68 IPR009057 -
Eupl14g00225 87 Gene3D - 29 70 - -
Eupl14g00225 87 MobiDBLite consensus disorder prediction 1 20 - -
Eupl14g00225 87 CDD SANT 28 67 IPR001005 -
Eupl14g00225 87 ProSiteProfiles Myb-like domain profile. 30 67 IPR001005 -
Eupl14g00225 87 FunFam MYB-like transcription factor 28 70 - -
Eupl14g00225 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 70 - -
Eupl14g00225 87 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00225 Eupl-Chr14 2786874 2788022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00225 28 85 MYB Transcription Factor Family AT5G52600 50.000 2.15e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl14g00225 Myb_DNA-binding 5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00225 K09422 - nnu:104603973 149.828