Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00199 ATGGCGGTCTACTGTGTCTTTGTTAAGCTCTTAGACGGAAAAACTACAACCCTAAGGTTTTCTTCCCCAACTGTCTCCGGAGAATCCATAAAGAGACATCTCTATAAGATAACCCAAATCCCTTTGCAGCACCAACGGTTAGTCACTGGTCGTCAACAGATCTACGAAGAGACCCTAATTACAGTCCCTGAAAATGGCGGGTTCTTCACAATTAACCTTCTCCTCCGTCTTCTGGGCGGAAAAGGAGGGTTCGGATCTCTCCTTCGAGGTGCCGCGACGAAAGCCGGGCAGAAGAAAACCAACAACTTCGATGCGTGCAGAGACATGAGTGGGCGAAGGCTTCGTCACGTTAACGCAGAGAAGAAATTGGAGGAGTGGAAAGCCGATGCTGAGGAGCGGAAATTGGAGAAAGTCGCCGAGGATTTCATTAAGAAGAAGGCGAAAGCCGTGAAGAAATCGGGGTCGGGGGAGTCGGAGAAGTATATTGAGAAATATAGGGAGGATTCGGCCAAGTGTATGGAGGATGTCGAGGCGTCGGTGAGGGAATCGTTTGGTCTCTACGAGGATTCGAAGCGGAAGATCTTGCCCTCTGCGGGGTCAGCGTCGAAGCGATTGAAGTTATGGATGGTGAAAGAAAAGGTGGATGAAAGCGATAGCAGTGATGAGGATGAGAGTGACGAGGAAGATGAGAAATCTGTTGTTCTTAATGATGGAATTTATGCGGTGAGAAATAAGGATGGTGAAGGGAGTTCGGGTTCAGTCTCTGGGGTTCAATCGGATGGGGAGTCTTCGGGTGGAGGTTCAACACACAGCAATTTGGAGGAAGAAAATGTGATTGTTAAGCTGGGAGAGTCCGAGTCGGGGGAAGGTTCTGGAAGTGGAGCACTTCATGCTGAAGCAAACCGTTCTGTTGAACCCAATTTGGGGGTTCAGGAAGAAGTGGTTTCTGGAACTGATGTTGGTCATGCCGTAGAAAACAGCTCTCTTGATATTGAATCTGGAATTCAGGAAGAAACAGTTGGTGAGGGCACACGCATTTTAAGTTTGGGAGTGGTGGAAAGTTCGGAAACCAGAGCAATTGTTGCTGAAGCAACTGGTTCTGTTGAGCCCAAATTGGGAGTTCATGAAGAAGCAGTGATGTTGAACACAAACAATTCTGATTTGGAGAAGCCACTGAATTTTGACGATTTTAAATCGGCAGCAGAGATGGAGGTTCTTGGTATGGAAAGGTTAAAAGCTGAGTTGCAAACACGTGGAGTGAAATGTGGGGGTACCCTGAAAGAGCGTGCCGTGAGACTTTTCCTGCTCAAAACAACGCCAGTAGAGATGCTGCCCAAGAAGCTGCTGACCAAAAAATGA 1359 0.4776 MAVYCVFVKLLDGKTTTLRFSSPTVSGESIKRHLYKITQIPLQHQRLVTGRQQIYEETLITVPENGGFFTINLLLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKKLEEWKADAEERKLEKVAEDFIKKKAKAVKKSGSGESEKYIEKYREDSAKCMEDVEASVRESFGLYEDSKRKILPSAGSASKRLKLWMVKEKVDESDSSDEDESDEEDEKSVVLNDGIYAVRNKDGEGSSGSVSGVQSDGESSGGGSTHSNLEEENVIVKLGESESGEGSGSGALHAEANRSVEPNLGVQEEVVSGTDVGHAVENSSLDIESGIQEETVGEGTRILSLGVVESSETRAIVAEATGSVEPKLGVHEEAVMLNTNNSDLEKPLNFDDFKSAAEMEVLGMERLKAELQTRGVKCGGTLKERAVRLFLLKTTPVEMLPKKLLTKK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00199 452 MobiDBLite consensus disorder prediction 248 274 - -
Eupl14g00199 452 Pfam Silencing defective 2 N-terminal ubiquitin domain 5 152 IPR024974 -
Eupl14g00199 452 SUPERFAMILY Ubiquitin-like 4 81 IPR029071 -
Eupl14g00199 452 Coils Coil 116 136 - -
Eupl14g00199 452 PANTHER SPLICING FACTOR SF3A-RELATED 1 449 - -
Eupl14g00199 452 Pfam Replication stress response SDE2 C-terminal 384 451 IPR025086 -
Eupl14g00199 452 Gene3D - 3 80 - -
Eupl14g00199 452 MobiDBLite consensus disorder prediction 217 231 - -
Eupl14g00199 452 CDD Ubl_ubiquitin_like 6 60 - -
Eupl14g00199 452 MobiDBLite consensus disorder prediction 214 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00199 Eupl-Chr14 2422986 2428542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00199 392 451 C2H2 Transcription Factor Family AT5G06160 41.667 1.35e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00199 K25059 - ming:122061588 457.603