Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00172 ATGGGTTACGGTAGGCTCGGATCTTCCGAGTTTATTTCTACGTTAGCTTCATTGTCCGAGGCTATCCCGAACCAGACTTCGAACCTACCGAGGAGAAAGCGCAAGCTCATTCTCCTCACTGTCCTGTCTCTTATCCTACTTGTTACCTCCGCGGTCTCTGCTGGACTTCTTGTTCACTTTCGAACCAGAGGCTCGGTTGTGACCGAGGCTACGGTTCGGAGGAAACTCACACAAGCCATATCCAAGACATGCAGCAATACTCGGCATCCGGGTCTCTGTGTCAACTCGCTCCAGGATTTCCCTGGTGCGCTCAGCGCTGGCGAAAGCGAACTCGTTCACATTTCCGTCAACGTAACGCTCCATCGCTTTGGAAAGGCGTTGTACGTCGCATCAGGTATAGCTAACTTGGCAATGGATACACGTGTACGGTCAGCATACGAGGATTGTCTCGAGCTCTTAGAAGACTCAATGGATCAGCTCTCTATGTCGTTATATTCCGTCTCCCCATTACCGGACCTGAAGGTCCAGAATGTGGGGTCCAGAGACGACGTGATAACTTGGCTGAGTGCGGCACTGACGAACCAGGACACGTGTATGGAGGGATTTGAAGGCGTGAACGGGTACGTGAGTTATCACATGAAGGAGCATATGAGGGATCTATCGGAGCTGGTGAGTAATTGTCTTGGGATCTTTGCGGTTTCGAGTAAAGGTCAGGACTTTTCTGGTATTCCGATACAAAACCGGCGGAGGAGGCTGTTGAAAAGTAGTTCCCAGGCGGAGGAGAGTGGTTTTCCGGTTTGGATGACGAGGAGAGAGAGGAAATTGTTGCAGATGCCCGTACTAGGGATCCGACCCGATATTGTGGTGTCACAAGATGGGAACGGGACGTATAAGACAATCAGCGAGGCTATTAAAGCAGCTCCCCAGCAGAGTAATCGCCGAATTATTATTTACGTGAAAGCAGGAAGGTATGAGGAGAATAAAATATTGAAGGTGGGAAGAAAAAAGACGAATTTGATGTTCATTGGAGACGGGAAGGGTAAAACTATAATTTCAGGCGGTAAAAGCGTGTTCGACAACCTCACGACATTCCACACTGCTACCTTCGCTGCAAGTGGGTCTGGATTTATTGCAAGGGACATGACGTTCGTTAATTGGGCTGGCCCAGCCAAGCATCAGGCCGTGGCTCTCCGTGTGGGGGCAGATCATGCGGTGGTGTATCGTTGCAACATCATTGGATACCAAGACACATTGTACGTACACTCAAACCGTCAATTCTTCCGTGAATGCGATATCTACGGGACAGTCGATTTCATATTCGGGAACGCAGCTGTGGTATTCCAGAACTGCAGCCTCTACGCTCGTAAGCCCATGCCCCTACAAAAAAACACAATAACGGCCCAAAACCGTAAGGAACCTATTCAAAACACGGGGATCTCGATCCACAACTGTCGGATACTCGCCACGCCAGATCTCGAATCAGCCAAGGGCAACTTCTCGACGTATCTTGGCCGTCCATGGAAATTATACTCGAGGACGGTGTACATGCAGTCGTACATCGGGGACCACCTCCACCCACGTGGGTGGCTGGAGTGGAACGCAACGTTCGCACTTGATACACTGTATTACGGTGAGTACATGAATTATGGTCCAGGTGGAGCCATTGGACAGCGTGTCAAATGGCCTGGGTACCAGGTCATCAACGCTTCGGAGGCGAACAAGTTCACGGTAGCGCAATTTATATACGGATCGGCTTGGTTACCGTCAACAGGAGTGGCGTTCTTGGCAGGGCTATCGGTTTAA 1803 0.5036 MGYGRLGSSEFISTLASLSEAIPNQTSNLPRRKRKLILLTVLSLILLVTSAVSAGLLVHFRTRGSVVTEATVRRKLTQAISKTCSNTRHPGLCVNSLQDFPGALSAGESELVHISVNVTLHRFGKALYVASGIANLAMDTRVRSAYEDCLELLEDSMDQLSMSLYSVSPLPDLKVQNVGSRDDVITWLSAALTNQDTCMEGFEGVNGYVSYHMKEHMRDLSELVSNCLGIFAVSSKGQDFSGIPIQNRRRRLLKSSSQAEESGFPVWMTRRERKLLQMPVLGIRPDIVVSQDGNGTYKTISEAIKAAPQQSNRRIIIYVKAGRYEENKILKVGRKKTNLMFIGDGKGKTIISGGKSVFDNLTTFHTATFAASGSGFIARDMTFVNWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMPLQKNTITAQNRKEPIQNTGISIHNCRILATPDLESAKGNFSTYLGRPWKLYSRTVYMQSYIGDHLHPRGWLEWNATFALDTLYYGEYMNYGPGGAIGQRVKWPGYQVINASEANKFTVAQFIYGSAWLPSTGVAFLAGLSV* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00172 600 Pfam Pectinesterase 286 583 IPR000070 GO:0030599|GO:0042545
Eupl14g00172 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Eupl14g00172 600 Gene3D - 281 598 IPR012334 -
Eupl14g00172 600 CDD PMEI-like_3 84 232 - -
Eupl14g00172 600 FunFam Pectinesterase 281 598 - -
Eupl14g00172 600 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Eupl14g00172 600 NCBIfam pectinesterase inhibitor domain 68 232 IPR006501 GO:0004857
Eupl14g00172 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 233 IPR035513 -
Eupl14g00172 600 PANTHER PECTINESTERASE 49 588 - -
Eupl14g00172 600 SMART PMEI_2 75 230 IPR006501 GO:0004857
Eupl14g00172 600 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Eupl14g00172 600 SUPERFAMILY Pectin lyase-like 283 597 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00172 Eupl-Chr14 2102866 2106802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00172 1 600 Carbohydrate Esterase AT3G49220 64.111 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00172 - - nnu:104604019 855.129