Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00147 ATGGCGTATGGAGATAATTTCAGATGTCCCTCGATTTCGCAGCCGAATTATGCGGGGGAACGGACGGAACCAGGCTTTGGAGGCGACGATCTGTATTCGGAGCTATGGAGAGCTTGTGCGGGTCCTCTTGTCGATGTTCCTCGGCCGGGGGAGAGGGTTTTCTACTTCCCTCAAGGTCACATGGAGCAATTAGAAGCTTCAACAAACCAGGAATTAAATCAGAGGATTCCATTGTTTAATCTTGCTTCGAAGATCCTTTGTCGCGTTGTTCACATTCAGTTATTGGCTGAACAAGATACTGATGAGGTCTATGCACAAATTACCTTACAACCAGAGTCAGATCAAAATGAGCCCAGGAGTCCTGATCCATCTCTTGTGGAAACCCCGAGGCCTACTGTTCACTCGTTCTGCAAGATTTTAACTGCCTCTGATACGAGCACGCATGGGGGGTTCTCTGTTCTTCGGAAACACGCCAATGAATGTCTCCCTCCTTTGGACATGAACCAACCAACGCCAACTCAGGAATTGGCTGCTAAGGATCTTCATGGGTATGAGTGGCGATTTAAGCATATCTTCAGAGGTCAACCCCGGAGGCATTTGCTTACAACGGGTTGGAGTACGTTCGTCACGTCTAAAAGATTGGTTGCAGGGGATGCCTTTGTTTTCTTGAGAGGGGGGGAAAATGGTGAGCTACGTGTAGGAGTTAGGCGTCTTGCTCGCCAACAGAGCAGCATGCCATCATCCGTGATATCCAGCCAGAGCATGCATCTCGGAGTGCTTGCCACAGCATCTCATGCCGTTTCGACCCAGACCCTTTTCATCGTTTACTATAAGCCAAGGACGAGTCAATTCATAGTCAGCTTGAACAAGTATTTGGAAGCTGTTCACAATGGGTTTGCAGTTGGGAAGAGATTCAAGATGAGATTCGAAGGGGAGGATTCTCCTGAGAGAAGATTTACGGGTACAATAGTTGGGGTTGGAGACATTTCTCCCCAGTGGACAGATTCTAAATGGAGATCATTGAAGGTTCAATGGGATGAACCTGCCTCCATTCAGAGACCAGAGAGAGTTTCTCCATGGGAGATAGAGCCTTTTGTTGCTTCTGCACCTCCTTCAAACATGACTCAGTCGGCAATAATAAAGAACAAAAGGCCCCGACCATCAATAGATCTCCCAGTCCTTGAAACTACTACTAGTTCGGCACCTTCAACTTTCTGGTATCCCGGGTCGACCCAGTCCCATGAGCTAACTGGATTGAGTGCTCCTGAAGTTGAAAGCAATGAAAGCCAAGTTGTGTGGCCTCCTAAGCAGAAAGAAATTAAGGGCAATCTCATCAACCACAGCAGCAGCTGTAACTCAAGGACCTGGCCCGAGGGGGGATGGCCTTCTTCTCCCCTCATGAACGGTTCTCTGAACCTATTCCAGGATGCAGCTGAAGATAATAAAACTGTTTCTTTGTGGCCAGGTCTCACTGGTTATTCAACCCCTGATCATTTATCAAAGCCAAGTAATGGCTCGATGTATGACCCAGTGGAAAAAGGGAAGAAACCTGAGACAAGTAGTGGATACCGGTTGTTTGGGATTGAGCTAATCAATAACTCGAATACCCCAGCTCCTGTAGAGAAGCTGCCGACTTATCAGATCAATGTATCCTGCGCCACCACCAAAGGGACCACCCCAGCTAATGTGTCTGGAGCTGATTCAGACCAACAGTCAGGCCTTTCAAGGGCCTCAAAAGAACAGAAACAAGGTTTCTTACTGGCATCACCAAAGGATATCCAGAGTAAGAACTGCTCTACTTCTACCAGAAGTCGCACTAAGGTGCAAATGCAAGGGATGGCGGTTGGTCGGGCTGTGGACCTGACTGTGTTGGAAGGGTACGACGAACTTATAAATGAGCTGGAGGAGATGTTTGAGATAAAAGGAGAGCTTCGCCCCAGGAACAAGTGGGAAGTTGTATTCACTGATGATGAAGGGGATATGATGCTTGTGGGCGACGATCCATGGCCGGAATTCTGTAAGATGGCGAAGAAGATCTTCATCTATTCAAGCGAAGATGTGAAGAAGATGAGTCCAAGAAGCAAGCTTTCTTCATCATCTGTAGAGTTTGAAGGGACCGTTGTAAGCTTGGATTCAGAACTAAAAAATGAAACATGA 2157 0.4743 MAYGDNFRCPSISQPNYAGERTEPGFGGDDLYSELWRACAGPLVDVPRPGERVFYFPQGHMEQLEASTNQELNQRIPLFNLASKILCRVVHIQLLAEQDTDEVYAQITLQPESDQNEPRSPDPSLVETPRPTVHSFCKILTASDTSTHGGFSVLRKHANECLPPLDMNQPTPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGGENGELRVGVRRLARQQSSMPSSVISSQSMHLGVLATASHAVSTQTLFIVYYKPRTSQFIVSLNKYLEAVHNGFAVGKRFKMRFEGEDSPERRFTGTIVGVGDISPQWTDSKWRSLKVQWDEPASIQRPERVSPWEIEPFVASAPPSNMTQSAIIKNKRPRPSIDLPVLETTTSSAPSTFWYPGSTQSHELTGLSAPEVESNESQVVWPPKQKEIKGNLINHSSSCNSRTWPEGGWPSSPLMNGSLNLFQDAAEDNKTVSLWPGLTGYSTPDHLSKPSNGSMYDPVEKGKKPETSSGYRLFGIELINNSNTPAPVEKLPTYQINVSCATTKGTTPANVSGADSDQQSGLSRASKEQKQGFLLASPKDIQSKNCSTSTRSRTKVQMQGMAVGRAVDLTVLEGYDELINELEEMFEIKGELRPRNKWEVVFTDDEGDMMLVGDDPWPEFCKMAKKIFIYSSEDVKKMSPRSKLSSSSVEFEGTVVSLDSELKNET* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00147 718 MobiDBLite consensus disorder prediction 497 519 - -
Eupl14g00147 718 SMART B3_2 136 239 IPR003340 GO:0003677
Eupl14g00147 718 Pfam B3 DNA binding domain 136 237 IPR003340 GO:0003677
Eupl14g00147 718 Pfam AUX/IAA family 583 693 IPR033389 -
Eupl14g00147 718 SUPERFAMILY DNA-binding pseudobarrel domain 124 266 IPR015300 -
Eupl14g00147 718 SUPERFAMILY CAD & PB1 domains 597 679 - -
Eupl14g00147 718 MobiDBLite consensus disorder prediction 556 581 - -
Eupl14g00147 718 ProSiteProfiles B3 DNA-binding domain profile. 136 239 IPR003340 GO:0003677
Eupl14g00147 718 MobiDBLite consensus disorder prediction 109 129 - -
Eupl14g00147 718 Gene3D - 598 691 - -
Eupl14g00147 718 FunFam Auxin response factor 598 691 - -
Eupl14g00147 718 ProSiteProfiles PB1 domain profile. 603 695 IPR000270 GO:0005515
Eupl14g00147 718 FunFam Auxin response factor 298 369 - -
Eupl14g00147 718 CDD B3_DNA 134 237 IPR003340 GO:0003677
Eupl14g00147 718 Gene3D - 299 369 - -
Eupl14g00147 718 FunFam Auxin response factor 134 239 - -
Eupl14g00147 718 Gene3D - 133 238 IPR015300 -
Eupl14g00147 718 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 691 IPR044835 GO:0003677|GO:0006355|GO:0009725
Eupl14g00147 718 MobiDBLite consensus disorder prediction 556 579 - -
Eupl14g00147 718 Pfam Auxin response factor 263 342 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00147 Eupl-Chr14 1862878 1867959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00147 27 696 B3 DNA Binding Superfamily AT4G23980 60.089 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Eupl14g00147 B3 1.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00147 K14486 - ming:122082841 1067.37