Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00138 ATGGATATGCAAAGGCAGATTCAAACCAAGACCAATCAACCATGTGCTGCATGCCGGATGCTTCGTCGGAAATGTAGCGATAACTGCCTTTTAGCACCATATTTTCCAGCCGACGAACCCGAAAACTTTGTTGGCATACACAAAGTGTTTCGTGCTGGCAATGTTAGTAAAATGCTTCAGATGGTGGAGGAAACCAAGAGGGAGGATGCCGTGAAGAGCATAGTCTATGAAGCGAGTGCAAGGCTCCGAGACCCTGTTTATGGGAGTGCAGGCGCCATTTTCTATTTGCAGAAGCACGTTCAAGATCTCAAGGTGCAATTGGAGCTGACGAGAGCCCAACTTATCGAGTTGGGTAAACAAAGAGATCAGCTGTTGGGGATTCTAATGGATGTTCACCACCTCAATCCCATTTCGTCCCTTGATGATGCGATGTAA 435 0.469 MDMQRQIQTKTNQPCAACRMLRRKCSDNCLLAPYFPADEPENFVGIHKVFRAGNVSKMLQMVEETKREDAVKSIVYEASARLRDPVYGSAGAIFYLQKHVQDLKVQLELTRAQLIELGKQRDQLLGILMDVHHLNPISSLDDAM* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00138 144 Coils Coil 100 120 - -
Eupl14g00138 144 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Eupl14g00138 144 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 118 - -
Eupl14g00138 144 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00138 Eupl-Chr14 1766131 1768736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00138 14 133 AS2 family AT2G28500 50.833 2.16e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl14g00138 LOB 5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00138 - - ming:122061636 200.675