Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g00103 | ATGATAAAAGACATGATTATTAATGCCTCACTCGTTCCTGCTTCAGAAGTCCTTTCTCAGCTTGTGGAGGTCATAGTTGAGACTGTACATGCCGCCAAAGACGTCCTCATCGAGAAGGAGAGCTTTGCGGAACTCTCGACTTACTTGGAAAGGATCATTCCTGTTCTTAAAGAGTTGATTAAGAAAAACATCCATAACTCCGAGAGCTTAAACAATGCTACTGAGATTCTTGGCAGGGAGATTAAAATTGCGAAGCAGCTAGCTCTAGAGTGCAGCAAGAGAAACAAAGTCTATCTCTTAGTCAGTTGCCGGAGGATTGTTAAGTGCTTAGAGGCCACGACACGAGAGATTAGCCGTGCTCTGAGCCTCATCCCTTTGGCCTCACTGGATCTCTCATTGGGTATAAATGAAGAGATCAACAAGCTATGTGATAATATGCTGAAAGCAGAGTTTAGCACAGCTGTAGCAAAGGAAGAGATCTTGGAGAAAATCGAATTGGGAATACAGGAGAGGAATGTTGATCGTTCTTATGCAAATAAATTGCTGGTTCTCATCGCAGAGGCTGTTGGGATCTCAGCTGAACAGTCATCATTGAAGAAGGAATTTGAAGAATTCAAGAGAGAAATAGAGGATGCGCGGCTGAGGAAGGACCAGGCTGAGGCTATACAAATGGATCAGATCATTGCATTGCTTGGAAGGGCAGATGCCACTTCTTCGATTAAGGAGAAAGAGATGAAGTATTTCAACAAGAGGAAGTCTCTAGGTAATCAACTGTTGGAGCCTCTCCAGTCATTTTATTGCCCGATCACACGGGATGTTATGGTGGACCCTGTGGAGACCTCCTCTGGGCAGACATTTGAGAGAAGTGCCATAGAGAAGTGGTTTTCAGATGGGAACAACCTTTGTCCCTTGACCATGACGTCCTTAAACACGACAATACTACGGCCTAACAAAACTCTGCGACAATCAATCGAAGAATGGAATGATAGGAACACCATGATCACTATTGCTTCCATGAAACCCAAACTTCTGTCAGTTGAGGAGCAAGAAGTGCTTCATTCCCTAGGCCAGCTGCAGGATCTTTGTGAAGAAAGAGATTTGCACCGAGAATGGGTAACACTGGAGAACTACATACCGATTCTTATTGGACTTCTTGGTGCAAAAAATCGTGAGATAAGGAATCTTTCTTTGGTTATCCTTTGCATTCTGGCGAAGGATAGCAATGAGACCAAGGAAAGAATTGCAGATGTGGATAATGCCATTGAATCAATTGTTCGCTCCCTTGCACGTCGTATTGGGGAAAGTAAGTTAGCAGTGGCATTGCTATTGGAACTATCAAAAAGTAATATGGTACGTGATCGCATTGGGAGGGCCCAGGGCTGCATACTCCTCCTTGTGACCATGTCAAGCAGTGATGACACTCAAACTGCCAGAGATGCAAAGGAGATTTTGGAAAATCTCTCATTCCATGATCAGAATGTTATACAGATGGCAAAGGCAAATTATTTTAAACCTTTGTTGCAGCGTCTTTCTTCAGGACCAGAAAATGTCAAGATGATCATGGTGACAACTTTGGCTGAAATGGAGTTGAGTGATCACAACAAATCTGCTTTGTTTGAAGATGGGGTACTGGGACCGCTTCTTCACTTGGTCTCACTTGGTGATGCAGAGATGAAGAAAATGGCTGCCAAAGCTCTTCAGAACCTCTCAAGCCTACCTCAGAATGGCTTGCAGATGATTAAAGAAGGGGCAGCGGGCCCACTACTTGACCTCCTCTACCGTCACAGATCACCATCCAATAGATTGCGGGAACAGGTGGCAGCCATAATTACGAACCTTGCCATATCAACTGCAGCACATGAAACCAGTCAGGCGCAGGTGTCACTGCTGGAATCTGATGATGACATTTTCAGGCTCTTCTCTTTAATTAACTTGACAGGACCTGATATACAACAAAACATTCTTCGGACCTTTCATGCCATGTGCCAATCCCCCTTTGCAACAGACATCAAGTCTAAGCTAAGACAGTGCTCAGCTGTTCAAGTATTGGTTCAATTGTGCGAGCTTGATAATGTTACAGTACGGGCAAACGCTGTGAAGCTGTTCTGTTGTTTGACCGAAGATGGCGATGACGACATGTTATCGGAGCACGTGAATCTGGGGTGCATTGAAATTTTACTCAAGATTATCAAAACTTCCAATGATGAGGAAGAGATGGCTGCTGCAATGGGTATCATCTCTAACCTCCCCACAGACCACACCCAGATCACTCAGTGGCTTCTAGATGCTGGGGCGCTTCCAATCATTTTCAGATTTCTCACAGATGGAAATCGTAATGGTTCCTATAATAATCAGCTAATAGAAAATGCTGTTGGAGCTATATGCCGTTTCACTGTTTCAAGGAACCAGGAATGGCAAAAGAGAGCAGCAGAAGCTGGCATTATCCCGGTGCTGGTCAAGTTGCTAGGATCTGGAACCACTTGGACAAAACGGCATGCAGCCATTTCACTTGCACAGTTTTCAGAGAATTCGATTGGGCTGAGCAGACCAATAGAGAAACGTGTGGGATTCTGGTGCTGCTCGTCGCCATCTGAAACTGGCTGCCCAGTGCACATGGGCATCTGTACGGTGGAGTCATCATTTTGCCTGGTGGAGGGTGATGCAGTGGAACCCCTGGTGAGGGTGCTCGGGGAGCCAGATGTTGGGGCCTGCGAGGCCGCTTTACAGGCGCTGTTGACACTTATTGATGGTGAAAGACTGCAGAGTGGTAGTAAGGTGCTTAGTGAGGCAAATGCCATTGTGCCAATCATAAGGTTACTAGGCTCCCCTTCTACTGAATTGCAGGAGAAGGCTCTGCATGCTTTAGAAAGAATTTTCCGGCTGGTGGAGTTCAAGCAAAAGTATGGAGCTTCTGCTCAGATGCCTTTGGTTGACATAACTCAGAGGGGAAATAGTACTATGAGACCTTTGGCAGCCCGAATACTTGCTCACTTGAATGTGCTTCATGAGCAATCTTCTTATTTCTGA | 3027 | 0.4533 | MIKDMIINASLVPASEVLSQLVEVIVETVHAAKDVLIEKESFAELSTYLERIIPVLKELIKKNIHNSESLNNATEILGREIKIAKQLALECSKRNKVYLLVSCRRIVKCLEATTREISRALSLIPLASLDLSLGINEEINKLCDNMLKAEFSTAVAKEEILEKIELGIQERNVDRSYANKLLVLIAEAVGISAEQSSLKKEFEEFKREIEDARLRKDQAEAIQMDQIIALLGRADATSSIKEKEMKYFNKRKSLGNQLLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTSLNTTILRPNKTLRQSIEEWNDRNTMITIASMKPKLLSVEEQEVLHSLGQLQDLCEERDLHREWVTLENYIPILIGLLGAKNREIRNLSLVILCILAKDSNETKERIADVDNAIESIVRSLARRIGESKLAVALLLELSKSNMVRDRIGRAQGCILLLVTMSSSDDTQTARDAKEILENLSFHDQNVIQMAKANYFKPLLQRLSSGPENVKMIMVTTLAEMELSDHNKSALFEDGVLGPLLHLVSLGDAEMKKMAAKALQNLSSLPQNGLQMIKEGAAGPLLDLLYRHRSPSNRLREQVAAIITNLAISTAAHETSQAQVSLLESDDDIFRLFSLINLTGPDIQQNILRTFHAMCQSPFATDIKSKLRQCSAVQVLVQLCELDNVTVRANAVKLFCCLTEDGDDDMLSEHVNLGCIEILLKIIKTSNDEEEMAAAMGIISNLPTDHTQITQWLLDAGALPIIFRFLTDGNRNGSYNNQLIENAVGAICRFTVSRNQEWQKRAAEAGIIPVLVKLLGSGTTWTKRHAAISLAQFSENSIGLSRPIEKRVGFWCCSSPSETGCPVHMGICTVESSFCLVEGDAVEPLVRVLGEPDVGACEAALQALLTLIDGERLQSGSKVLSEANAIVPIIRLLGSPSTELQEKALHALERIFRLVEFKQKYGASAQMPLVDITQRGNSTMRPLAARILAHLNVLHEQSSYF* | 1009 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g00103 | 1008 | ProSiteProfiles | U-box domain profile. | 260 | 334 | IPR003613 | GO:0004842|GO:0016567 | |
| Eupl14g00103 | 1008 | Pfam | U-box domain | 265 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
| Eupl14g00103 | 1008 | SUPERFAMILY | ARM repeat | 504 | 960 | IPR016024 | - | |
| Eupl14g00103 | 1008 | Gene3D | - | 636 | 853 | IPR011989 | - | |
| Eupl14g00103 | 1008 | Gene3D | - | 342 | 635 | IPR011989 | - | |
| Eupl14g00103 | 1008 | SMART | Ubox_2 | 264 | 327 | IPR003613 | GO:0004842|GO:0016567 | |
| Eupl14g00103 | 1008 | SUPERFAMILY | RING/U-box | 254 | 332 | - | - | |
| Eupl14g00103 | 1008 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 241 | 339 | IPR013083 | - | |
| Eupl14g00103 | 1008 | SUPERFAMILY | ARM repeat | 346 | 528 | IPR016024 | - | |
| Eupl14g00103 | 1008 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 542 | 584 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g00103 | - | - | nnu:104594089 | 1491.09 |
Showing 1 to 1 of 1 entries