Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00082 ATGTTGGAGGGAGGGGAGTACTCTCCAGTATCAGCAGCAGCCAAGGTAGAGTCCTTCACCCGACTCGAATCATTCCCGATGACTAATAGGAAAAAGAAGAACAAGAACACGAGGAGATTCAGCGATGAACAGATCAGGTCGTTGGAGTCCATGTTCGAGTCAGAGTCGAAGCTCGAACCCAAAATGAAGCTTCAGCTGGCAAGAGAGCTCGGCCTGCAGCCTCGTCAGATTGCTATATGGTTCCAGAACAGGAGAGCTAGGTGGAAGTCAAAGCAGCTCGAGCGAGACTATAGCATACTGAGAACCAATTATGATACTCTAGCTTCCCGATTGGAGTCTTTGAAGAAAGAGAAGCAATCCTTACTGATACAGTTGCAGAAGCTGAATGATCTGCTGGAAAATCCTCGAGAGGAGAGCAGGTTGTGCAGGTTGGGTTTGGCTGGAAACAGCACTGATGGCGACTCAGATAGTGGAGACACCAAGTATGAATCTGAACAGAAACCTAGCCTGTTATTGGAAGGATCGGACCTTAAAGTGGCTGCATGTTCAGCCGACGAGAACGGCAAAAATATCGAGTGTTTAGGCCAGGAAGAAGAACTCGACTTTATGAACGTCGCAGAGCCTGCAGATGGAGTCTTAGCATCACCTGAAAACTGGTGCAGCTTAGATTCCAGTGATCTTTTCGATCAGTCATGTAGCAGTTCACAGTGGTGGGAGTTCTGGTCTTGA 729 0.4801 MLEGGEYSPVSAAAKVESFTRLESFPMTNRKKKNKNTRRFSDEQIRSLESMFESESKLEPKMKLQLARELGLQPRQIAIWFQNRRARWKSKQLERDYSILRTNYDTLASRLESLKKEKQSLLIQLQKLNDLLENPREESRLCRLGLAGNSTDGDSDSGDTKYESEQKPSLLLEGSDLKVAACSADENGKNIECLGQEEELDFMNVAEPADGVLASPENWCSLDSSDLFDQSCSSSQWWEFWS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00082 242 SUPERFAMILY Homeodomain-like 23 93 IPR009057 -
Eupl14g00082 242 Pfam Homeodomain 38 89 IPR001356 GO:0003677
Eupl14g00082 242 SMART HOX_1 34 95 IPR001356 GO:0003677
Eupl14g00082 242 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 31 176 IPR045224 GO:0003700
Eupl14g00082 242 MobiDBLite consensus disorder prediction 144 167 - -
Eupl14g00082 242 Gene3D - 27 98 - -
Eupl14g00082 242 ProSiteProfiles 'Homeobox' domain profile. 31 91 IPR001356 GO:0003677
Eupl14g00082 242 FunFam Homeobox-leucine zipper protein ATHB-7 18 91 - -
Eupl14g00082 242 Pfam Homeobox associated leucine zipper 91 132 IPR003106 GO:0006355|GO:0043565
Eupl14g00082 242 PRINTS Lambda-repressor HTH signature 62 71 IPR000047 GO:0003677
Eupl14g00082 242 PRINTS Lambda-repressor HTH signature 71 87 IPR000047 GO:0003677
Eupl14g00082 242 ProSitePatterns 'Homeobox' domain signature. 66 89 IPR017970 GO:0000981|GO:0006355
Eupl14g00082 242 Coils Coil 97 131 - -
Eupl14g00082 242 CDD homeodomain 35 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00082 Eupl-Chr14 1157715 1160464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00082 1 242 Homeobox Transcription Factor Family AT2G46680 44.828 8.41e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl14g00082 Homeodomain 7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00082 K09338 - nnu:104593490 294.664