Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00078 ATGGGGCAGTGCTACGGCAAAAACATTTCCGTCGTCGAAGACGACACCGCCGCCGATCTTTGTCAGAAGTCGTCAACATCAACGGCGGTTAACGGCGGTGTTACCGTTTCTTCTGTGAAAAACACACCGGTTCACCCCTCCTCCACTAGCCCTTGGCCTAGTCCTTACCCTCACGGTATTGGTAGTCCTCTCCCTGCCGGAGTATCTCCATCACCGGCAAGGTCTGCGAAATCGACTCCCCGGAGATTCTTTCGCCGGCCATTCCCTCCCCCGTCGCCGGCGAAGCACATCAAGGCGTCGCTAGCGAAGCGGCAGGGGTCGGCCAAGCCGAAGGAGGGGCCCATTCCGGAGGACGGAGCCGACGTTGAGCGGCAGCTCGATAAGAGCTTCGGATACGGGAGGAATTTCGGGGCGAAGTATGAATTGGGGAAGGAGATTGGGCGGGGGCATTTCGGTCATACTTGCTCGGCGAAAGCCAAGAAGGGAGAGCTTAAAGGTCAACAAGTCGCCGTGAAGATTATCTCCAAAGCTAAGATGACAACAGCTATATCAATTGAAGATGTTCGTAGGGAGGTGAAAATCTTGAAAGCTTTATCAGGCCATAAGAATCTGGTCAGGTTTCATGATGCATGTGAGGATGACAATAACATCTACATAATCATGGAATTGTGTGAAGGTGGAGAGCTACTAGACAGAATTTTATCTAGAGGTGGAAGATACATGGAGGAAGATGCCAAAGTCATTGTTGTGCAAATTTTAAGTGTTGTTGCCTTTTGTCATCTTCAAGGTGTTGTTCACCGTGATTTGAAGCCAGAGAATTTTCTCTTCGCCACTAGAGATGAAGATGCACTGATGAAGCTTATTGATTTTGGTCTTTCTGACTTTATAAGACCAGATGAAAGACTCAACGATATTGTTGGCAGTGCATACTATGTCGCACCTGAAGTCCTCCATAGATCATACAGTCTAGAAGCAGATATTTGGAGTATCGGTGTCATAACATATATCTTGTTATGTGGTAGCAGACCATTCTGGGCTCGAACAGAATCGGGAATTTTTCGTTCTGTGCTAAGATCTGATCCTAACTTTGATGATTCACCTTGGCCTACGGTATCACCAGAAGCTAAAGATTTTGTGAAAAGGCTTCTGAACAAGGACCACAGAAAAAGAATGTCTGCTGCACAAGCTCTGACTCACCCATGGTTGCGAGATGAAAACCGTCCAGTGCCTTTAGATATATTGATCTATAAGTTAGTCAAGTCATACCTTCGTGCCACACCTTTCAAACGTGCAGCATTAAAGGCTCTGTCGAAAGCTTTGACAGAGGATGAGTTGGTGTACCTTAAGTCTCAGTTTAAGCTCTTGGAACCAAATAAAGATGGGTGCGTCTCCCTTGAGAACTTCAGAATGGCACTCGTGCGAAATGCAACTGATGCCATGAAAGAATCGAGGGTTCCGGACATTTTAAATATGATGGAATCACTCTCTTATAAAAAGATGGATTTTGAAGAGTTCTGTGCTGCTGCGATTAGCACATATCAGCTGGAGGCTCTTGAAGGGTGGGAGCAGATTGCCTTTACGGCTTTTGAGTATTTTGAACAGGAGGGGAACCAGGTCATCTCAGTCGAGGAATTGGCACGGGAAATGAATCTGGGACCTATGGCTCACTCAATCCTAAAGGATTGGATAAGAAACTCCGATGGAAAGCTTAGTTGCTTGGGGTATACCAAATTTTTGCATGGTGTGACATTACGGAGTTCAAATACAAGACATCAGTAG 1779 0.4649 MGQCYGKNISVVEDDTAADLCQKSSTSTAVNGGVTVSSVKNTPVHPSSTSPWPSPYPHGIGSPLPAGVSPSPARSAKSTPRRFFRRPFPPPSPAKHIKASLAKRQGSAKPKEGPIPEDGADVERQLDKSFGYGRNFGAKYELGKEIGRGHFGHTCSAKAKKGELKGQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKNLVRFHDACEDDNNIYIIMELCEGGELLDRILSRGGRYMEEDAKVIVVQILSVVAFCHLQGVVHRDLKPENFLFATRDEDALMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRSDPNFDDSPWPTVSPEAKDFVKRLLNKDHRKRMSAAQALTHPWLRDENRPVPLDILIYKLVKSYLRATPFKRAALKALSKALTEDELVYLKSQFKLLEPNKDGCVSLENFRMALVRNATDAMKESRVPDILNMMESLSYKKMDFEEFCAAAISTYQLEALEGWEQIAFTAFEYFEQEGNQVISVEELAREMNLGPMAHSILKDWIRNSDGKLSCLGYTKFLHGVTLRSSNTRHQ* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00078 592 FunFam CDPK-related kinase 1 438 510 - -
Eupl14g00078 592 MobiDBLite consensus disorder prediction 26 121 - -
Eupl14g00078 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 567 - -
Eupl14g00078 592 SUPERFAMILY Protein kinase-like (PK-like) 139 424 IPR011009 -
Eupl14g00078 592 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00078 592 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Eupl14g00078 592 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00078 592 FunFam CDPK-related kinase 3 132 304 - -
Eupl14g00078 592 Gene3D - 420 510 - -
Eupl14g00078 592 Gene3D Transferase(Phosphotransferase) domain 1 134 419 - -
Eupl14g00078 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Eupl14g00078 592 MobiDBLite consensus disorder prediction 26 47 - -
Eupl14g00078 592 Gene3D - 426 572 - -
Eupl14g00078 592 FunFam CDPK-related kinase 1 133 228 - -
Eupl14g00078 592 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Eupl14g00078 592 CDD STKc_CAMK 139 401 - -
Eupl14g00078 592 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00078 592 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Eupl14g00078 592 SUPERFAMILY EF-hand 428 581 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00078 Eupl-Chr14 1102685 1116445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00078 1 586 EF-hand Containing Proteins AT3G50530 59.365 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl14g00078 Pkinase 3.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00078 K13412 - nnu:104593544 984.556