Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00076 ATGCAAGACATGATCTCTTCTTCATCTTCTCCATCTTCAATCTTCTCACTCTGTCAAGAAACCCCACCAACACTCCAAAAACGCCTCCAATTTCTCGTCCAAAGCCGACCAGAATGGTGGGCTTATTCCATTCTCTGGCAACCTTCTAACGATGACAATGGTCGTCTCGTTTTAACTTGGGGTGATGGATATTTCCGAGGCACCAAAGATTTTGTCTCCCAACACCATCACCTACAACAGCCTCAGAAATTGACGGTCATGAAAGGAATTCAAGCTCCAATCAATATTAACCCGGAAATTGACTGCTCGATGGACGGAGATACCATCGATGTTGAATGGTTTTACTTGGTGTCGTTAACGCGGTCTTTCGCTGCTGGAGATGGAATACCCAGCCGGGCTTATAGTTCCGGCGCTTCTGTATGGTTGACTGGGACTTCAGAGCTTCAGTTTTTTAATTGTGAGAGAACAAAAGAAGCTCAAATGCATGGAATTCAGACTTTGGTCTGTATCCCTACTTCAACTGGGGTAGTCGAGGTGGGTTCTTCGGATTTGATCATAAAGAATTCGGAGCTTCTGAAAGAGGCCAAGTCTCTATTTCAATCCGACGTCGTTGACTTGCTCTCGAAACAGCCAAGTCATGATGGAAGTCCGACTCAGTTGTTTCTCGATCGAAATTTTTCTTCCTTCGTACATATCGATATAACTACTACTTCCGGTGTAGTACATGAAAATAAGCAAAAAGAAGAAGCCGAGACAAGGAAGGAAGTCGGGGCAATAGCAGTAATGGCAGCGCAATCGTCTTCAGTCGACTCGGAGCATTCGGACTCGAAAGACCCCTTTTACGCTGCTGCTGTAGAGAAAAGGAGGCCGAAGAAGAGAGGGAGAAAGCCTGGGAACGGAGCAGACATGCCGTTGAACCATGTCGAGGCCGAGCGTCTGCGGCGCGAGAAGCTTAACCATCGCTTTTACGCGCTCAGAGCCGTGGTTCCCCACGTCTCGAGGATGGACAAAGCATCTCTGCTCGCCGACGCGGTGTCCTACATCAATGAGCTAAAGGCCAGAGTAGAGGAGTTGGAAAGAAAATTCAAGAAAGTAAAGATGGAAACGGTTGGTTTCCTGGACCTGGATCATCAAAGCCACACCACTAGGGGGGTCATGATGGAAGTAGAGGTAAAGATTCTTGGGTCGGACGCAATGATCAGAGTCCAATCAGAGAATCTGAACCATCCATCTGCGAGACTGATGGACGCACTTCGCGACCTCGAGTTTCAAATCCACCATGCGAGCGTGTCGAGCGTGAACAAGCTAATGCTGCAGGATGTCGTGGTTAGGCTCCCTAATAGATTTATGGGTGAGGAGGACTTGAAAGCTGCTCTCCTTCAAAGACTAAAGAAGTAG 1398 0.4771 MQDMISSSSSPSSIFSLCQETPPTLQKRLQFLVQSRPEWWAYSILWQPSNDDNGRLVLTWGDGYFRGTKDFVSQHHHLQQPQKLTVMKGIQAPININPEIDCSMDGDTIDVEWFYLVSLTRSFAAGDGIPSRAYSSGASVWLTGTSELQFFNCERTKEAQMHGIQTLVCIPTSTGVVEVGSSDLIIKNSELLKEAKSLFQSDVVDLLSKQPSHDGSPTQLFLDRNFSSFVHIDITTTSGVVHENKQKEEAETRKEVGAIAVMAAQSSSVDSEHSDSKDPFYAAAVEKRRPKKRGRKPGNGADMPLNHVEAERLRREKLNHRFYALRAVVPHVSRMDKASLLADAVSYINELKARVEELERKFKKVKMETVGFLDLDHQSHTTRGVMMEVEVKILGSDAMIRVQSENLNHPSARLMDALRDLEFQIHHASVSSVNKLMLQDVVVRLPNRFMGEEDLKAALLQRLKK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00076 465 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 199 IPR025610 -
Eupl14g00076 465 PANTHER MYC 13 462 IPR045084 GO:0003700|GO:0006355
Eupl14g00076 465 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 351 IPR011598 GO:0046983
Eupl14g00076 465 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 368 IPR036638 GO:0046983
Eupl14g00076 465 MobiDBLite consensus disorder prediction 267 304 - -
Eupl14g00076 465 Coils Coil 341 368 - -
Eupl14g00076 465 MobiDBLite consensus disorder prediction 271 287 - -
Eupl14g00076 465 Gene3D - 301 368 IPR036638 GO:0046983
Eupl14g00076 465 Pfam Helix-loop-helix DNA-binding domain 306 351 IPR011598 GO:0046983
Eupl14g00076 465 SMART finulus 308 357 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00076 Eupl-Chr14 1069335 1071553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00076 1 463 EF-hand Containing Proteins AT5G46830 35.050 1.08e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g00076 bHLH-MYC_N 3.9e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00076 - K13422 cave:132186976 499.975