Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00063 ATGCCGGAAGACATGAGCTTGTCAGTGAACGGGCAGTCTCGGGTCCCTCCAGGTTTCAGGTTTCATCCAACGGAAGAAGAGCTCTTGCATTACTACTTGAGGAAGAAAGTGGCATACCAGAAGATCGACTTGGATGTAATCCGAGAAGTCGATCTTAATAAGCTAGAGCCATGGGATATACAAGAGAAATGCAAAATAGGATCCGGCCCACAAAACGACTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCAACGGGGACTCGGACTAATCGCGCAACAGCGGTCGGATTCTGGAAAGCGACTGGCCGTGATAAGATCATCCATAGCAGCTTCAAACGAATCGGAATGAGGAAAACTCTAGTGTTTTATAAGGGTAGAGCCCCACATGGCCAAAAATCAGATTGGATCATGCACGAATACAGACTCGACGACAACACCACCGATACCAAGGCCAGTAATTCAACGGGAGAGATGACACAGGAAGACGGATGGGTGGTGTGCCGTGTTTTCAAGAAGAAAAATCACTACAAGACAGTAGACAACCCTAGCAACTCCTCGATCATGTCTGATACGAACACACAGATGCTTGGTTCGAGTAATGATGGATCATTGGACCAGATTCTTGAATACATGGGAAGGACGAGTTGCAAGGAGGAATCTGAAACCAGCAAAAATATCAAAATCAACATGATCACCAGCAACAACAACAACAACAACAACAACAAACACATAATTAGACTTGACTATGGGGTCCATGAAAGATTCAAGCAACTTCAGGAGCTAGAGTGCCCAACTCTCCCACCAATTTTGAATGATTGCAGATGTCTCGATCAGGTCTCTAGTAGTCAAGTTTGCTATCAACCGATAGATGTTCAAGTTGTTACGGAGGCTGAAGCTTCAGTCACCAGCCAAGGCAGTGATAATCTGAATTCGGTTTACAACACTGAACCGGGTCCTAATGACTGGGTCTCCCTGGACCGCCTTATCGCCTCCCATCTCAATGGCCAAACAGATACATCCAAGCAACTTGCTTGTTTGAATGATCCCAATCCCGCCTTCTACTCCACCACTGATCATGATCTCCAAATACTACAAGTACGCTCAGCCAACAGATTGTATCATAGCGTCCAGGACTATAACAGCGAAATTGATCTGTGGAGCTTCATCCGACCATCGTAG 1182 0.4594 MPEDMSLSVNGQSRVPPGFRFHPTEEELLHYYLRKKVAYQKIDLDVIREVDLNKLEPWDIQEKCKIGSGPQNDWYFFSHKDKKYPTGTRTNRATAVGFWKATGRDKIIHSSFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTDTKASNSTGEMTQEDGWVVCRVFKKKNHYKTVDNPSNSSIMSDTNTQMLGSSNDGSLDQILEYMGRTSCKEESETSKNIKINMITSNNNNNNNNKHIIRLDYGVHERFKQLQELECPTLPPILNDCRCLDQVSSSQVCYQPIDVQVVTEAEASVTSQGSDNLNSVYNTEPGPNDWVSLDRLIASHLNGQTDTSKQLACLNDPNPAFYSTTDHDLQILQVRSANRLYHSVQDYNSEIDLWSFIRPS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00063 393 ProSiteProfiles NAC domain profile. 15 173 IPR003441 GO:0003677|GO:0006355
Eupl14g00063 393 SUPERFAMILY NAC domain 9 173 IPR036093 GO:0003677|GO:0006355
Eupl14g00063 393 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 236 - -
Eupl14g00063 393 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Eupl14g00063 393 FunFam NAC domain-containing protein 24 177 - -
Eupl14g00063 393 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00063 Eupl-Chr14 942938 944407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00063 1 245 NAC Transcription Factor Family AT2G46770 65.116 1.05e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl14g00063 NAM 6.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00063 - - msin:131248632 523.087