Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00059 ATGTCTCAACAAAGGCAATTTCAGATGGTGGGAGGAAACAATGCTGGGCAGTTTGGTGACACAACGTATACCAAGATCTTTGTGGGAGGGTTGGCTTGGGAGACTCAGAGAGAAACTATGAGGCGTTATTTTGAGCAGTTTGGGGAGATCCAAGAAGCGGTGGTGATCACCGATAAGAATACTGGAAGATCTAAGGGATATGGTTTTGTGACATTTAAGGATCCAGATGCAGCAATGAGAGCATGTCAGGATCCATCACCTGTGATTGATGGAAGAAGAGCAAACTGCAATCTTGCATCTCTTGGTGCACATAGGACTCGCCCATCTACTCCTCAACACGGTACGGGGAGGTTCAGAACTGCACCCGGATCCTCGGCTCCACCTGCCTATCAAGGATCATCCTCGACGTACTTCCATCAACCTGCTCAATTCGCATATCCTTATTCAGCTTATGGGTACTCTGGATACTCACAGGAAAATATGTATCCCATGAATTATTACAGTGTATATGGAGGGCAACAGTATTCACCTTACTACACAACAGCAGCAGCGTCAACGCCGCCGGGAATTTTTCCTAATTTCTATCCATTCTATGCTCAATATGCGCAGAGTAGCCAAGCACAGGGTTTTGGAGTTCAGTATCCCCAAATGATACAATACCCGTATATGCCACAGCATTACAGCGCAGCTGGGATCCTATCGCTACCTAATTCGGTTGCCTCGACAACCTCGACCACCACTGGTGTGATGAGTACAGCCGGGGTGGTGGCAGGAACAGGATCCAGTGCTTCACAAGCAGGAACTACCACCGAACAGAGTTCATCAGCTTAA 831 0.4765 MSQQRQFQMVGGNNAGQFGDTTYTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAMRACQDPSPVIDGRRANCNLASLGAHRTRPSTPQHGTGRFRTAPGSSAPPAYQGSSSTYFHQPAQFAYPYSAYGYSGYSQENMYPMNYYSVYGGQQYSPYYTTAAASTPPGIFPNFYPFYAQYAQSSQAQGFGVQYPQMIQYPYMPQHYSAAGILSLPNSVASTTSTTTGVMSTAGVVAGTGSSASQAGTTTEQSSSA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00059 276 PANTHER BOULE-RELATED 15 249 - -
Eupl14g00059 276 MobiDBLite consensus disorder prediction 101 132 - -
Eupl14g00059 276 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 18 105 - -
Eupl14g00059 276 MobiDBLite consensus disorder prediction 102 119 - -
Eupl14g00059 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
Eupl14g00059 276 SMART rrm1_1 25 97 IPR000504 GO:0003723
Eupl14g00059 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 83 IPR000504 GO:0003723
Eupl14g00059 276 CDD RRM_RBM24_RBM38_like 24 99 - -
Eupl14g00059 276 Gene3D - 1 117 IPR012677 -
Eupl14g00059 276 SUPERFAMILY RNA-binding domain, RBD 19 121 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00059 Eupl-Chr14 896026 899863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00059 20 100 C2H2 Transcription Factor Family AT2G19380 45.679 4.78e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00059 - - vvi:100257521 402.519