Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00040 ATGGCACTTGAGATTGGATTCTGTGATCTCTTAAAGTATCCTCGTCTCTTCTTCTCTGTTAGTTCGCTCTCTGGTTTGAGGTTTCCTTCATTGAATCCCAAGCTGACTTTAATGGTGTTTTGTTGCTTGAATGATCCACGCAGGTTTGATAGTGCACAACATATCACAATACAATTCCGTGAACAATCGATATTGCAGATATATCTAAGCTGCGCGCTGCCTGGTCAAGGAAAGGCAGGTAAGGAGTGGAGGACCTGGTCAAGTAAAGGAGCCCTCCCTAGCTTCAATCCATCAATGGGTTTCCCTTGTGTTGGCATGAAAGTATCAAAGCTTGTAAGAGAACTACAAGACCTACTAGCTCATCTCAAGTTCATGCTCATGGTCGCACTCTTTCACTTGGGTCTAATATTCAATCTACCTCATCAAGCCGATGACGTCGTTTTACCAGCGAATCTCCCTTCTCCGGCATTGGTCCCAGTTCCAGTAACATTGAGTCCTATTATGTTGGAACCAATCAAGAAGAGGCTTCCAGTAGTAAGATTTGGTGATTTTCTCGATAGATTGGGAGTAATAATCGAAGACTCTGAGCCACTAATCTGTGCTGTGTGCTTGAGTTTCTTGGAGAGAAGTCATGAGATCAGAGAGCTATCAAATTGTTCTCATGTGTTTCATAGAGAATGCCTGGATAAGTGGGTCGATCATTGTCAGATGACATGTCCTTCCTGTAGATGTAAGCTAGTACCAACTCAAGGAGAGAGAGATCCATGGATGGTCGAAAGGATGTACTACCTATTTGGTGAGGATTGGTGA 810 0.4346 MALEIGFCDLLKYPRLFFSVSSLSGLRFPSLNPKLTLMVFCCLNDPRRFDSAQHITIQFREQSILQIYLSCALPGQGKAGKEWRTWSSKGALPSFNPSMGFPCVGMKVSKLVRELQDLLAHLKFMLMVALFHLGLIFNLPHQADDVVLPANLPSPALVPVPVTLSPIMLEPIKKRLPVVRFGDFLDRLGVIIEDSEPLICAVCLSFLERSHEIRELSNCSHVFHRECLDKWVDHCQMTCPSCRCKLVPTQGERDPWMVERMYYLFGEDW* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00040 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 249 IPR013083 -
Eupl14g00040 269 SUPERFAMILY RING/U-box 195 257 - -
Eupl14g00040 269 SMART ring_2 200 242 IPR001841 -
Eupl14g00040 269 Pfam Ring finger domain 200 243 IPR001841 -
Eupl14g00040 269 PANTHER RING ZINC FINGER PROTEIN-RELATED 135 250 - -
Eupl14g00040 269 ProSiteProfiles Zinc finger RING-type profile. 200 243 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00040 Eupl-Chr14 708734 718003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00040 170 268 C3H Transcription Factor Family AT3G43430 42.857 1.42e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00040 - K16281 nnu:104586568 175.252