Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00038 ATGGGTTTCCCTTGTATTGGCTTTAAAGTGGCAAAGCTTGTAACAGTCTTACTAGACCTAGTAGCCTATGTTAAGTTCATGGTCATGGTGGCACTCTTTCATCTTGGTCTATTGGGTCCGTCGGATCAACCGTATTCTTGGGGACATGACGCCAATTCTGTAATATCAGGAAGCACGACTACTCCATCTTCGGCATCGGTTCCAGTAGTTCCATGGGCAATTATGAGTCCGACTGTGTTGGAGACAATCAAGAAGAGGCTTCCAGTGGTAGAATTTGGTGATTTTGTTCAGAGATCGGGAGTAGGTATAGACTGTGAGCCGGTTTGTGCCGTGTGCTTGAGTTGCTTAGAGAGATTCGATGAGATCAGAGAGCTATCAAATTGTTTTCATGTGTTCCATAAAGAGTGCCTGGATAAGTGGGTGGATGAAAGTCAGGTCACTTGCCCTTTGTGTAGATCTAAGCTACTGCCCTCTCAAGCGGAGGAGATGAGGGGTGGTGGTGGTGATCCATGGATGGTGGAGAGGATCGCCTACGTTTTTGGTGAGGATTGGTGA 555 0.4685 MGFPCIGFKVAKLVTVLLDLVAYVKFMVMVALFHLGLLGPSDQPYSWGHDANSVISGSTTTPSSASVPVVPWAIMSPTVLETIKKRLPVVEFGDFVQRSGVGIDCEPVCAVCLSCLERFDEIRELSNCFHVFHKECLDKWVDESQVTCPLCRSKLLPSQAEEMRGGGGDPWMVERIAYVFGEDW* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00038 184 SMART ring_2 109 151 IPR001841 -
Eupl14g00038 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 157 IPR013083 -
Eupl14g00038 184 Pfam Ring finger domain 109 152 IPR001841 -
Eupl14g00038 184 SUPERFAMILY RING/U-box 108 158 - -
Eupl14g00038 184 ProSiteProfiles Zinc finger RING-type profile. 109 152 IPR001841 -
Eupl14g00038 184 PANTHER RING ZINC FINGER PROTEIN-RELATED 39 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00038 Eupl-Chr14 701168 701829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00038 81 183 C3H Transcription Factor Family AT3G43430 46.847 2.67e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00038 - K16281 nnu:104593333 191.815