Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00034 ATGGAGAGACTCCAAGGACCCATCAATCCCTGTTTGTTTGGTGAATATTTGAATGTGGAGAGTTTAGAACAAGGAGGAAGTTCTCTGGATTTCAGTTATGGGCCGTTTGTGAACACTGAGAGCTTCAGATTTGAGGACGAACAACAACCGTTTTCGACCTCAAGCTTACAAGACAAAATGCCGTTCCTCCAGATGTTACAAAGCGTGGAATCCCCACCATTTTCCCCGTTTACAGAACCCAATTTCGAGTTACTCTTAAGATTGCAGCAGCAAAAGAAGCCATGGGAGAGGAACTACTTAAGTGAAATGGACTCTCGCGTTCAGACACGGGAGCTCGAAAGCTGTATTACTCATGACGTATCGGAAGCACATTCACCGGTTAAATCCGAAACCAAGGAGCATCAGTACCCACATTCGTCGTCGTGTCCGGAGGTTGTGAGCTCTGTATACAATCGAGAACACAATTCACCGGAGAACAAAACTGGGTCAAAACCGAAGACCCAATTCGCGAAACCTCCCCCAATTAGCCGTGAGAGAAGAAAACGAAAGCGAACGAGGCCTAGCAAGAACAGAGATGAGGTTGAGAGCCAACGAATGACACACATTGCCGTGGAACGCAACCGGAGAAAGCAAATGAACGACCATCTCAACTCGCTCCGCTTACTCATGCCCACCTCCTTCATTCAAAGGGGTGACCAAGCTTCGATTATCGGAGGAGCTATAGACTTTGTGAAGGAATTGGAGCAATTGTTACAATCTCTCCAGGCTCAGAAGAGAATGCGGAGGTCACAAGAAGAAGGCAACACCAACACGTCCGAGTCCTTGATCCCATTCAATGGATTCTTTACGTCGCCGCAGTACACAACGTACATGGAAGCCGAGAACAAGTCGGCAGGGGTGGCAGACATAGAAGTGATTGTGATTCAAACTCATGTGAACCTGAAAATTCTATCTCCAAGAAGGCCTGGACAGCTTCTCACTGCTATTGCTTCGTTAGAAGATCTCAGACTAACCATCTTACACCTCAACGTTACATCCTCAGAAAGCTCCGTTCTTTACTCTTTCAATCTCAAGATAGAAGATGACTGTAAGCTTGGATCAGCTGATGAGATTGCAACTGCAGTTCATCAAATATTCAGCTACATCAACGGTAACTGA 1158 0.462 MERLQGPINPCLFGEYLNVESLEQGGSSLDFSYGPFVNTESFRFEDEQQPFSTSSLQDKMPFLQMLQSVESPPFSPFTEPNFELLLRLQQQKKPWERNYLSEMDSRVQTRELESCITHDVSEAHSPVKSETKEHQYPHSSSCPEVVSSVYNREHNSPENKTGSKPKTQFAKPPPISRERRKRKRTRPSKNRDEVESQRMTHIAVERNRRKQMNDHLNSLRLLMPTSFIQRGDQASIIGGAIDFVKELEQLLQSLQAQKRMRRSQEEGNTNTSESLIPFNGFFTSPQYTTYMEAENKSAGVADIEVIVIQTHVNLKILSPRRPGQLLTAIASLEDLRLTILHLNVTSSESSVLYSFNLKIEDDCKLGSADEIATAVHQIFSYINGN* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00034 385 MobiDBLite consensus disorder prediction 118 137 - -
Eupl14g00034 385 Gene3D - 194 270 IPR036638 GO:0046983
Eupl14g00034 385 SMART finulus 202 253 IPR011598 GO:0046983
Eupl14g00034 385 PANTHER MAX DIMERIZATION, MAD 122 382 - -
Eupl14g00034 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 265 IPR036638 GO:0046983
Eupl14g00034 385 Pfam Helix-loop-helix DNA-binding domain 197 248 IPR011598 GO:0046983
Eupl14g00034 385 Coils Coil 244 264 - -
Eupl14g00034 385 CDD bHLH_AtFAMA_like 199 272 - -
Eupl14g00034 385 MobiDBLite consensus disorder prediction 138 166 - -
Eupl14g00034 385 MobiDBLite consensus disorder prediction 118 199 - -
Eupl14g00034 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00034 Eupl-Chr14 640245 642683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00034 44 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 42.135 9.21e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g00034 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00034 - - nnu:104593286 496.123