Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00026 ATGGAGTTTATGCAAGGAAGAGAAGGGTATTGTGAGGCAGAAGAGGAGGAGGAGATGATTGGAGATATGGGTAAGCTTCCTTTTTCTTCTTCCTTTTCTTCCTCTCCTTCTTCTTCTCAGTACAAAGGCGTTGTTCCTCAGCCGAACGGACGATGGGGAGCGCAGATTTGCGAGAAGCACCAGCGGGTGTGGTTGGGAACGTTTGAGTCAGAAGAAGAGGCCGCGAGGTCGTACGATAGAGCTGCGCTCAAGCTCCGCGGCTGTGACGCTGTTACCAATTTCAACCATAAACTAGAATTCATGGACTTGTCGCCGAGGAATCAGGAGAACAGAGGACGGGGAGAATCTGATGGTAGTGGAAGCAGCAGTGGTGGCGTTGAGAGAGAACACATGTTTGATAAGGTTGTGACGCCTAGCGATGTTGGGAAGCTGAACCGCCTTGTTATTCCGAAGCAGCACGCAGAGAAGTACTTCCCACTAGATTCGTCGGCAAATGAGAAGGGCTTACTGTTGAATTTTGAAGATCGGAGTGGGAAACCATGGAGATTCCGATACTCTTACTGGAATAGCAGCCAGAGTTACGTGATGACAAAGGGTTGGAGTCGGTTCGTGAAGGAGAAGAAGCTTGATGCAGGAGACATCGTGTCGTTCGAGCGTGGGGTCGGTGAATCGGGCAAGGATCGGTTGTACATCGATTGGAGGCGCAGGCCAGATGCACCAGACCCAGCATCGCTTCCGCCTCTACCGCTTGCCGTCCCATGGGGCCGACTATTCTTGCCGCCGCCACTGCCGCCGACCATGTCCATGCCACATGACCATGTGCATTTGCAGCAGCTCAATTATGTTTATGACCATCATCATCATCATCGTCATCACAACCAATACCAGAGTGGTTACAATGTGGTAAATTCAGGCCCAGGTTCAGTTTATTACCTGAGACCATTAGCCCCACAACAGGTTGGAGTAGTGCAAGATGTGCCGATGGTATTCGACTCCGTTCCAGTGGTCCACGGTAAAGCTGCAGCCAAGCGAGTTAGGCTGTTTGGTGTGAACCTGGAGTGCCCCATATCGGAAGACCCCGAATGCGACATGTTGTCCTCCACCACAACAATTTCATCTCTCTCTCCTCAGCTTCCCCCTTCCCTTCCTCTACAATTAAGGCTCTACAATGGAGCCCCACAACCATCAACGCCAACCGACTTGCCAAACAAAGGGAAACCATCCTTCTCCTTCGATTTTGATATCTGA 1248 0.5104 MEFMQGREGYCEAEEEEEMIGDMGKLPFSSSFSSSPSSSQYKGVVPQPNGRWGAQICEKHQRVWLGTFESEEEAARSYDRAALKLRGCDAVTNFNHKLEFMDLSPRNQENRGRGESDGSGSSSGGVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPASLPPLPLAVPWGRLFLPPPLPPTMSMPHDHVHLQQLNYVYDHHHHHRHHNQYQSGYNVVNSGPGSVYYLRPLAPQQVGVVQDVPMVFDSVPVVHGKAAAKRVRLFGVNLECPISEDPECDMLSSTTTISSLSPQLPPSLPLQLRLYNGAPQPSTPTDLPNKGKPSFSFDFDI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00026 415 Pfam B3 DNA binding domain 132 236 IPR003340 GO:0003677
Eupl14g00026 415 FunFam AP2 domain-containing protein RAP2.8 39 96 - -
Eupl14g00026 415 SMART rav1_2 40 101 IPR001471 GO:0003700|GO:0006355
Eupl14g00026 415 MobiDBLite consensus disorder prediction 102 129 - -
Eupl14g00026 415 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Eupl14g00026 415 SMART B3_2 132 237 IPR003340 GO:0003677
Eupl14g00026 415 SUPERFAMILY DNA-binding pseudobarrel domain 129 236 IPR015300 -
Eupl14g00026 415 Gene3D - 126 241 IPR015300 -
Eupl14g00026 415 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Eupl14g00026 415 FunFam B3 domain-containing protein 125 245 - -
Eupl14g00026 415 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 363 IPR044800 GO:0003700
Eupl14g00026 415 Pfam AP2 domain 40 87 IPR001471 GO:0003700|GO:0006355
Eupl14g00026 415 ProSiteProfiles AP2/ERF domain profile. 40 95 IPR001471 GO:0003700|GO:0006355
Eupl14g00026 415 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Eupl14g00026 415 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Eupl14g00026 415 MobiDBLite consensus disorder prediction 391 415 - -
Eupl14g00026 415 CDD B3_DNA 130 226 IPR003340 GO:0003677
Eupl14g00026 415 ProSiteProfiles B3 DNA-binding domain profile. 132 237 IPR003340 GO:0003677
Eupl14g00026 415 CDD AP2 40 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00026 Eupl-Chr14 569488 571925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00026 38 276 RAV Transcription Factor Family AT1G68840 52.747 1.15e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Eupl14g00026 B3 1.6e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00026 K09287 - nnu:104593229 471.855