Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00023 ATGGCAGTGTTGTCTTTGAAATCTCTACCATTGGGATTCAGATTTCGTCCCACGGATGAAGAACTCGTCAATCACTACTTACGGTTGAAAATCAACGGCAACGAATCGGACGTTGAGGTGATTCCAGAAATTGATGTTTGTAAATGGGAGCCATGGGATTTGCCCGGCTTATCGGTGATTAAGACGGAGGATCCAGAATGGTTCTTCTTCTGCCCACGTGATCGAAAGTATCCCAATGGTCATCGTTCTAACAGAGCCACAGAAGCCGGGTATTGGAAAGCCACCGGAAAGGATCGTAAAATCAAGGCTCGCTCGTCTGGCATGAATTTGATTGGTATGAAGAAGACACTCGTTTTCTACAGAGGACGTGCTCCTAAGGGTTTGAGGACCAGCTGGATAATGCACGAGTATCGCACAACTGAGGAAGAGCTTGATGGCACAAACATCGGCCAGGGTCCCTTTGTTCTCTGTCGCTTATTCAAGAAGCCAGATGAGAAGATTGAGAATTCAAACTGTGATGAAGTGGAACCGACTGGCTTCTCTCCTACTGCAACCAAATCTTCTCCTGATGGTACGCCATCAAACCAAGCATTGGTTCAAGCAACTCCAGAATCAAATGTGCAAGTTGGGAAGCAACCGTCAGGTATTGAGAGGTGGCTGGCCGATAAGTTAGACAGCCTAACCTCGGATGCTCTAGTACCCGAAGAGAGCCACTGCAACAGCTATATGGCTTCTGATGTAGACGATCACGAAGCAGAAATAAGAGCTACAGAGGTGGATCCACTGCTCAAAGAAGATTGGAGTTCGTTATATAAGCAGACCTTTGAGCCTCTGGATTCCAAGGTTTTCTCCCAGTTGCATTCTCAAATGCATTCTGGGCTAGGATCTTCCCACATGGATTCCCCCTTCCCCAGTGACTTTGGCAATGGCCACAATGGGATGCTCTTTCAGGATGGTACAGACGAGCAGGACGTCTCTGTCACAGATTTCTTGGAGGCGGTTCTCAACAAGGATGAGTTCTGCTGTGAAGAGTCAACTAGTCAGAAGAACTCGGCTATTGAGAGGGGGGGCCCTGCTGGTGACATTCATATGTTACAGGCTGGACCATGGGGTTCTGTGTTTTGCAAGGACAACGGATCAAGCAGTGACCCGGACACAGAAGTGACACAAGCACAGTATCATCCGGAGTTGGAAGCTTCCCGGTGGTTTAAGGAGCCTGTGGATACTAAGGATTATTTCCTGATGCAAACTGCTTTTGGATCTAATGCATCTGAAGCCTTCCATGGTGGTGAATATGGAAAGAGAAGTACGGGTCTCCTTTGGGAGGACTCAGTTGGAATGGATGCTTCATCTACCGACTCTGCTACAGGCCCCTTCCATGATTTATTCAATGGTTACGAAGAGCCAACCATTCAGATAAATCCCATTAACAACAATGGTGGTCATGTTGAGACCGGAATTAAGATAAGGGCCCGACAGCCACAATATCAGTCAAGTTCGCACAACTTTGTTACACAGGGTACTGCCCCAAGAAGGATCCATTTGCAAAGGAGGTTATCCCGCAGAGTTTCCTTTAAGGGGAGAGAATGGAGCTGCAATGCAGAAGACGATGAGACGAAACCCACAGTTACCGAGCAGGCTGGGGAATCTACAGAATGTACAACCACCGATGAGCCCCAAAAGGAGACCTCCCTCGTTGATTCCGACAATAACAAGAAAACTGTGCAAGAACTCAACACAAAGCTGAGATTGAGATCAAGTTCTTGTGTGCGTCACTCAAGTTTCTTATCACGTCGTATGGTCTGTGTAGCAATCGTTATAATCCTGTTCATCCTCTTTATTGGAGCATGGAAATACCAATAA 1863 0.4707 MAVLSLKSLPLGFRFRPTDEELVNHYLRLKINGNESDVEVIPEIDVCKWEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGHRSNRATEAGYWKATGKDRKIKARSSGMNLIGMKKTLVFYRGRAPKGLRTSWIMHEYRTTEEELDGTNIGQGPFVLCRLFKKPDEKIENSNCDEVEPTGFSPTATKSSPDGTPSNQALVQATPESNVQVGKQPSGIERWLADKLDSLTSDALVPEESHCNSYMASDVDDHEAEIRATEVDPLLKEDWSSLYKQTFEPLDSKVFSQLHSQMHSGLGSSHMDSPFPSDFGNGHNGMLFQDGTDEQDVSVTDFLEAVLNKDEFCCEESTSQKNSAIERGGPAGDIHMLQAGPWGSVFCKDNGSSSDPDTEVTQAQYHPELEASRWFKEPVDTKDYFLMQTAFGSNASEAFHGGEYGKRSTGLLWEDSVGMDASSTDSATGPFHDLFNGYEEPTIQINPINNNGGHVETGIKIRARQPQYQSSSHNFVTQGTAPRRIHLQRRLSRRVSFKGREWSCNAEDDETKPTVTEQAGESTECTTTDEPQKETSLVDSDNNKKTVQELNTKLRLRSSSCVRHSSFLSRRMVCVAIVIILFILFIGAWKYQ* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00023 620 MobiDBLite consensus disorder prediction 534 571 - -
Eupl14g00023 620 MobiDBLite consensus disorder prediction 174 211 - -
Eupl14g00023 620 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Eupl14g00023 620 MobiDBLite consensus disorder prediction 544 561 - -
Eupl14g00023 620 FunFam Nac domain-containing protein 86 18 165 - -
Eupl14g00023 620 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
Eupl14g00023 620 Gene3D NAC domain 18 167 IPR036093 GO:0003677|GO:0006355
Eupl14g00023 620 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 243 - -
Eupl14g00023 620 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Eupl14g00023 620 MobiDBLite consensus disorder prediction 169 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00023 Eupl-Chr14 524359 528959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00023 2 549 NAC Transcription Factor Family AT1G33060 43.964 1.65e-130 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl14g00023 NAM 7.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00023 - - tss:122661115 672.93