Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00022 ATGAGGTGCGCATATGAGCAGTCAATATTTCTGAAAGCCCATGCTTTTCCAGACTTACACGTTAGTGTTTGGTGGATTGGAGAGCTAAAGGGGTATTGGCAATACTGTAAATATAACCCAATGCAGAATGATGAGTCGGATATAAATGGTGTCGCCATTGGAGACCACCGTCTTGATGTCTCATACCTTGAAGAACAAGGGAACCTGAATAATTTCCCTTTGGAGAAGGGAGGTGGTCAGAGTTCACTGGGAGAACCTGCTGAGAAATGTGCTCTGACTGTGATCTCTAATGGGGAATCTGGTAATCAGGTTCTCATGACTTTAGAGCACGAGGGGAATGTTTTGAAGACTATGGGCACCAACAAGGAGGATGAAACAACTGATGCCATGGCAACTACTACGAAGGGTTTCTTGACGAGAAGTGAAAGTTCTCACGACGAATGCAGAGTTTGTCAGCACCAAACAGAAGAAGCTCTGATAGATCTTGGATGTCGATGTCGAGGTGGGCTTGCTAAAGCTCACCGTTCGTGCATAGAAACTTGGTTTCATACTAGAGGTTCAAATACATGTGAGATATGCCAGCAGGTAGCTTCAAATGTGCAACCTCCAGAGTCCCATCCAAGTACAAATTATTGGGCTTGGAGGATGAATCCAACTTTTAGAGGGTCCAGTATTGCACTTGAACGTCAAAGGGGTTGTTTTAATCCACTTTTGGTGGCATTCACAATCCTTATTGGTGGCCTTCTGTTGGATGTGCTGATATCCATATCCCTTGGCCTCTCTGCGCTGCCTGTTAACATTATAATTGGTATTCTCATCTTGCTAGGACTTGGAACCATCCTTCGGCTTGCACTTGAATGCTGCCATGAGTGGGGTTTACAGAGAGCAGTCCAAAGGGTGGACACACATGTAAATCTCGGATACCATTCTTCTGTGTAG 939 0.4494 MRCAYEQSIFLKAHAFPDLHVSVWWIGELKGYWQYCKYNPMQNDESDINGVAIGDHRLDVSYLEEQGNLNNFPLEKGGGQSSLGEPAEKCALTVISNGESGNQVLMTLEHEGNVLKTMGTNKEDETTDAMATTTKGFLTRSESSHDECRVCQHQTEEALIDLGCRCRGGLAKAHRSCIETWFHTRGSNTCEICQQVASNVQPPESHPSTNYWAWRMNPTFRGSSIALERQRGCFNPLLVAFTILIGGLLLDVLISISLGLSALPVNIIIGILILLGLGTILRLALECCHEWGLQRAVQRVDTHVNLGYHSSV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00022 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 204 IPR013083 -
Eupl14g00022 312 ProSiteProfiles Zinc finger RING-CH-type profile. 140 200 IPR011016 GO:0008270
Eupl14g00022 312 SMART ringv_2 147 194 IPR011016 GO:0008270
Eupl14g00022 312 SUPERFAMILY RING/U-box 143 196 - -
Eupl14g00022 312 PANTHER ZINC FINGER, RING-CH-TYPE 93 268 - -
Eupl14g00022 312 Pfam RING-variant domain 148 193 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00022 Eupl-Chr14 510347 522840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00022 147 200 C3H Transcription Factor Family AT2G37950 52.632 3.82e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00022 - - tss:122664054 295.819