Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00017 ATGAAGACGATCTTGGCTTCGGAGACGATGGACATCCCAGATGGGGTGAAGATAAAGGTGAAGGCTAAGTTGATCGAAGTGGAAGGTCCACGAGGAAAGCTCACCAGGAACTTCAAGCATCTCAACTTGGATTTCCAACTCATCAAGAATCCCGAAACGGGGAAGAAGCAGCTCAAGGTCGACGCCTGGTTCGGCTCCCGGAAGACCACGGCCGCCATCCGCACGGCTCTCAGCCACGTGGATAATCTCATCACGGGCGTCACCAAGGGTTACCGCTACAAGATGAGATTCGTCTATGCTCACTTCCCCATCAACGCCAGCATCACCAACTCCAACAAGAGCATCGAGATCCGTAACTTTCTCGGTGAAAAGAAGGTCCGGAAGGTGGATATGCTTGACGGTGTGACCATTCTCCGGTCTGAGAAGGTTAAGGATGAACTTGTATTGGATGGGAATGATGTTGAACTTGTCTCCAGATCAGCTGCCTTGATAAACCAGTTGCATCCGCACCATGCAAGCTATGTATCACTCAAAAAAGTCTCAAACGTTTTCCCCACAGCCAAACAAGGGAAAGCAACCCGTTCCAATCCCAGCACACAACGGTGCTTTCCCCCCAAAGGAAAGGCGAAATCTAACGATGAAGAAAAGAAGCACCCCTTTTTATCTGCTGAGTTGTTGTTAGTGAGTTTGCTACCGGTCAAGGGGCTGCCGGTGTTGCTGATCACATCATCATTGCTTGGAGTTGCTGGACAGCTCACGTTGGTGGAGCTGGAAACAGATGCATGCTCTTCCATTTGCGGTGACCTGTTCAGAGCATGGCAGTGTGGGCAGTAA 834 0.5048 MKTILASETMDIPDGVKIKVKAKLIEVEGPRGKLTRNFKHLNLDFQLIKNPETGKKQLKVDAWFGSRKTTAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNFLGEKKVRKVDMLDGVTILRSEKVKDELVLDGNDVELVSRSAALINQLHPHHASYVSLKKVSNVFPTAKQGKATRSNPSTQRCFPPKGKAKSNDEEKKHPFLSAELLLVSLLPVKGLPVLLITSSLLGVAGQLTLVELETDACSSICGDLFRAWQCGQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00017 277 Gene3D - 91 174 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 SUPERFAMILY Ribosomal protein L6 1 90 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 MobiDBLite consensus disorder prediction 188 202 - -
Eupl14g00017 277 FunFam - 91 165 - -
Eupl14g00017 277 MobiDBLite consensus disorder prediction 188 215 - -
Eupl14g00017 277 FunFam 60S ribosomal protein L9 1 90 - -
Eupl14g00017 277 Pfam Ribosomal protein L6 12 90 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 Pfam Ribosomal protein L6 102 170 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 SUPERFAMILY Ribosomal protein L6 91 170 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 Gene3D - 1 90 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Eupl14g00017 277 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 172 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00017 Eupl-Chr14 456534 465407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00017 1 166 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 84.337 5.09e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00017 K02940 - csin:114282581 308.916