Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00004 ATGAAAGAAAGTTGTAGAGTCATGCTCCTGCAATTGCTTCTGCTCCACCTCATTATGTTACCCGCATTGGCGGTATCATCGACTTCTGAAGCCTTGCCTGGTTGTCCAGATAAATGTGGAAACGTGAACATTCCCTACCCGTTTGGCATCCGAGACGGATGCTACTATATGGATGATCCCGGTTTGCCATTCAGGTTTAATGTAACATGCAAAGACCAGAATTATGGCACTCCGAAACCCTTCGTTGGAGACCTTGAGGTTCTAAATATATCACTTCTGGGCGCCCAAATGGTCGTTGATGGTGTGTATGCGCTTGACTGTTATAATCCTCGAGGGCAGAAACTTTTTAATCCCAATACCACAAGTGGGTCGATCGATTTGAGGGCAAGCCCATTTACTTTTTCATTCGCTCGCAACAAGTTCGCGGCCATAGGGTGTGACACCATGGCTTACATCAGTGAGTCCAAGGACAAAAACTTCAGAAGTGGATGCATGTCGTTCTGCAATAACTTCACAAACCTGATCAATGATTCTTGCTCCGGTATCGGTTGTTGTCAAACCTCAATTCCCCAGGGACTTAAAAGGTTTAACATCAGTGTCGATAGCTCGTTCAACCACACTGAGTTCCCAGACAACCACTGCAGCTATGCCTTCCTAGCTGATCAAGAGTGGTTCACTTTCAAAGTATCGGATCTCTTCATGACTGGTACTTTCAATAGAACTATTCCCTTGGTAATGGACTGGGCAATTGATAACAAGACATGCGAACAAGCTCGAAGAGGAGATCATTACGCTTGCCGGTCACCAAATACCCATTGTGCTAACTCCACCAATGGACCTGGATATCGGTGTTACTGCAACGAGGGTTACCAAGGGAACCCTTATCTCCCCAAAGGATGCCAAGATATTGACGAGTGTGTCAACCCAAACAACATAACCTGCCATGCGGACGGGATTTGCGAAAACACCCCTGGGAGTTTTCATTGCTCTTGTAAACCTGGCTACCATGGTGACGGTACAAAAGATGAAGGAACCGGCTGCACCCGTGATACTAAATCATTTCCAGTACCGATACGCCTCGTTATAGGTCTTGGTCTAGGCCCTTTGTTTCTAATTCTTTCCAGTTCCTTGTTATACTGGTTGCTCAAGCAAAGAAGATTGATCAAACTCAGAGAGAAATTCTTCCAACAAAATGGAGGTTTACTGTTGCAACAACAAATCTCTTCACGTACAGGTGTTTCAGAGATAGCAAAGATTTTTCCTGTGGAAGACTTGAAACGGGCAACCAACAACTACGATGAGAGTCGAGTTCTTGGCCAGGGAGGCTATGGTACAGTGTACAAAGGAATTTTACCAGATAAGAGAGTAGTAGCCATTAAGAAGTCCAAATTAATGGATCAGAGCCAAATTACACAGTTCGTAAATGAGGTGGACATTCTTTCTCAAATCAACCACCGTAATGTGGTAAAGCTCCTAGGTTGTTGTTTAGAGACTGAAGTTCCCGTGTTAGTTTACGAATTCGTTTCTAATGGTACTCTCCTCCAACGCATCCATAACGAGAGTAACACAAGTACCATTTCATGGGATTACCGCTTAAGGATTGCCTCAGAAACTGCTGGAGCACTTGCTTATTTGCACTCAGCACACTCCATACCAATCCTTCACAGAGATGTCAAGTCTGCTAACATACTATTAGATGATAATTACATTGCAAAAGTATCTGATTTTGGAGCTTCAAGGTTGGTTCCTCTTGATCAAACTCAAATGACTACACTAGTTCAAGGAACATTAGGATACTTGGATCCAGAATGTTTTCAAACAGGTCAGTTAACTGAGAAAAGTGATGTTTATAGTTTTGGAGTTGTTCTTGTTGAGCTTTTAACTGGGGGGAAGCCAATTTCATTAGAAAGATCTGAACAACATAGAAGCTTGGCGATGTATTTCATTTCTTCAATCAAAGAAAATTGTCTATTACAAATTCTTGACGATCGAGTTGTGAATGAGGGGGACAAAAAGCAACTACTGGCGGTTGCAGAGCTAGCAAGGAGATGCTTAAAGCTAAAAGGGGAAGAGAGGCCTACAATGAAGGAAGTGGCAGCAGAGTTGGACAAATTGAGAATGTTCCAAAAACATCCATGGGTGCAACAAGACCACGAGGAGACTGAAATTTTGCTAGGTGAACCATCAAATTCTTCCACTGGAGATGAAACTGGTCAATATAGTGTGGGCAATGACTTCATGCTACCATTAGAGATTGCCCGATGA 2265 0.4322 MKESCRVMLLQLLLLHLIMLPALAVSSTSEALPGCPDKCGNVNIPYPFGIRDGCYYMDDPGLPFRFNVTCKDQNYGTPKPFVGDLEVLNISLLGAQMVVDGVYALDCYNPRGQKLFNPNTTSGSIDLRASPFTFSFARNKFAAIGCDTMAYISESKDKNFRSGCMSFCNNFTNLINDSCSGIGCCQTSIPQGLKRFNISVDSSFNHTEFPDNHCSYAFLADQEWFTFKVSDLFMTGTFNRTIPLVMDWAIDNKTCEQARRGDHYACRSPNTHCANSTNGPGYRCYCNEGYQGNPYLPKGCQDIDECVNPNNITCHADGICENTPGSFHCSCKPGYHGDGTKDEGTGCTRDTKSFPVPIRLVIGLGLGPLFLILSSSLLYWLLKQRRLIKLREKFFQQNGGLLLQQQISSRTGVSEIAKIFPVEDLKRATNNYDESRVLGQGGYGTVYKGILPDKRVVAIKKSKLMDQSQITQFVNEVDILSQINHRNVVKLLGCCLETEVPVLVYEFVSNGTLLQRIHNESNTSTISWDYRLRIASETAGALAYLHSAHSIPILHRDVKSANILLDDNYIAKVSDFGASRLVPLDQTQMTTLVQGTLGYLDPECFQTGQLTEKSDVYSFGVVLVELLTGGKPISLERSEQHRSLAMYFISSIKENCLLQILDDRVVNEGDKKQLLAVAELARRCLKLKGEERPTMKEVAAELDKLRMFQKHPWVQQDHEETEILLGEPSNSSTGDETGQYSVGNDFMLPLEIAR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00004 754 Gene3D Laminin 251 304 - -
Eupl14g00004 754 Gene3D Transferase(Phosphotransferase) domain 1 508 727 - -
Eupl14g00004 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Eupl14g00004 754 SMART egfca_6 302 348 IPR001881 GO:0005509
Eupl14g00004 754 Pfam Wall-associated receptor kinase galacturonan-binding 35 94 IPR025287 GO:0030247
Eupl14g00004 754 CDD STKc_IRAK 438 705 - -
Eupl14g00004 754 Gene3D Laminin 305 347 - -
Eupl14g00004 754 SUPERFAMILY EGF/Laminin 301 340 - -
Eupl14g00004 754 FunFam Wall-associated receptor kinase 2 253 300 - -
Eupl14g00004 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 714 IPR045274 GO:0007166
Eupl14g00004 754 ProSitePatterns Calcium-binding EGF-like domain signature. 302 329 IPR018097 GO:0005509
Eupl14g00004 754 Pfam Calcium-binding EGF domain 302 347 IPR001881 GO:0005509
Eupl14g00004 754 SMART serkin_6 432 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00004 754 FunFam Fibrillin 2 301 343 - -
Eupl14g00004 754 ProSiteProfiles EGF-like domain profile. 302 341 IPR000742 -
Eupl14g00004 754 ProSiteProfiles Protein kinase domain profile. 432 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00004 754 Gene3D Phosphorylase Kinase; domain 1 399 507 - -
Eupl14g00004 754 FunFam Wall-associated receptor kinase 2 402 507 - -
Eupl14g00004 754 Pfam Wall-associated kinase 176 287 IPR013695 GO:0004674|GO:0016020
Eupl14g00004 754 Pfam Protein tyrosine and serine/threonine kinase 436 702 IPR001245 GO:0004672|GO:0006468
Eupl14g00004 754 CDD EGF_CA 302 338 - -
Eupl14g00004 754 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 320 331 IPR000152 -
Eupl14g00004 754 FunFam Wall-associated receptor kinase 2 508 724 - -
Eupl14g00004 754 SMART egf_5 305 348 IPR000742 -
Eupl14g00004 754 SMART egf_5 254 301 IPR000742 -
Eupl14g00004 754 ProSitePatterns Protein kinases ATP-binding region signature. 438 461 IPR017441 GO:0005524
Eupl14g00004 754 SUPERFAMILY Protein kinase-like (PK-like) 413 702 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00004 Eupl-Chr14 79598 85577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00004 8 754 Receptor kinase-like Gene Family AT1G21230 45.191 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl14g00004 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00004 - - ming:122065288 876.7