Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00003 ATGGCTCTTCTTCTTCTTCCTCGTCAAACTTCTTCCTTCTTCGCCTTGTCTGCACTTGTGGGTCTCCTTTTTCTCTTAAACTCTTGCTTTTGCTTCCACCCCAAACACTTAAAAGTCCCACCCAAACACTTAAATGTCTCAAAGACTCGATTCCATTGGTCATCCGCTGGAGCGACCTGGTATGGAAGTCCCAATGGTGCTGGAAGTGATGGAGGAGCTTGTGGGTATGGGACTGATGTAGAGCAAGTTCCTTTCTCGTCAATGATATCAGCTGGAGGCCCGTCTCTATTTAAGTCGGGCAAAGGGTGTGGGGCTTGTTATCAGGTGAAATGTACGGAAAATTTGGCATGTTCGGGGAATCCAGTGAGGGTAGTGATTACGGACGAGTGCCCTGGGGGTCCATGTCTCTCAGAATCAGCTCATTTTGATTTAAGTGGAACTGCATTCGGAGCTATGGCAATTTCTGGCCAAGCCGATAAACTACGCAGTGCAGGTGTGCTACAGATACAATATCAACGGTGGGTATTTAATAGTGAAAATGAAATAAGGAAAATAAAAGCAATATATTGGTTTCGCATGTTGATCATCGTCACCAAAAATCAATCAATTTGGACGCTTACTAACTCATAG 630 0.4476 MALLLLPRQTSSFFALSALVGLLFLLNSCFCFHPKHLKVPPKHLNVSKTRFHWSSAGATWYGSPNGAGSDGGACGYGTDVEQVPFSSMISAGGPSLFKSGKGCGACYQVKCTENLACSGNPVRVVITDECPGGPCLSESAHFDLSGTAFGAMAISGQADKLRSAGVLQIQYQRWVFNSENEIRKIKAIYWFRMLIIVTKNQSIWTLTNS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00003 209 PANTHER EXPANSIN-B3 26 174 - -
Eupl14g00003 209 Gene3D - 35 174 IPR036908 -
Eupl14g00003 209 SMART dpbb_1 89 171 IPR007112 -
Eupl14g00003 209 Pfam Lytic transglycolase 90 171 IPR009009 -
Eupl14g00003 209 SUPERFAMILY Barwin-like endoglucanases 52 173 IPR036908 -
Eupl14g00003 209 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Eupl14g00003 209 PRINTS Expansin/Lol pI family signature 164 180 IPR007118 GO:0005576
Eupl14g00003 209 PRINTS Expansin/Lol pI family signature 93 111 IPR007118 GO:0005576
Eupl14g00003 209 PRINTS Expansin/Lol pI family signature 52 67 IPR007118 GO:0005576
Eupl14g00003 209 CDD DPBB_EXPB_N 53 173 - -
Eupl14g00003 209 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 173 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00003 Eupl-Chr14 25973 28393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00003 27 173 Expansin Gene Family AT1G65680 65.306 2.22e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00003 - - egr:104444460 237.269