Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00002 ATGACTGTAGCGTTTCACGTTGATGCCGGCTCCAACCCCAACTATTTTGCCAGTGTAATTGAATACGAAGATGGAGATGCTGACCTTGACAGTGTTGATCTCCGAGAAGCTTTGGATTCAGACACATGGGTACCCATGCAGCAATCGTGGGGTGCGGTCTGGATGCTTAACTCTGGCTCTGAGTTGCGAGCTCCGTTCTCTCTACGGCTGAAGGCCCTTGAATCCGGCCAGACGCTTGTGGCAAGTAACGTGATTCCGGCCGAGTGGAAGCCTGGCGTTACGTATCGATCAGTTATCAATTTTAAACACTAG 312 0.5064 MTVAFHVDAGSNPNYFASVIEYEDGDADLDSVDLREALDSDTWVPMQQSWGAVWMLNSGSELRAPFSLRLKALESGQTLVASNVIPAEWKPGVTYRSVINFKH* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00002 103 Gene3D - 1 98 IPR036749 -
Eupl14g00002 103 Pfam Expansin C-terminal domain 3 86 IPR007117 -
Eupl14g00002 103 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 14 97 IPR007117 -
Eupl14g00002 103 PRINTS Major pollen allergen Lol pI signature 21 36 IPR005795 GO:0005576|GO:0019953
Eupl14g00002 103 PRINTS Major pollen allergen Lol pI signature 52 69 IPR005795 GO:0005576|GO:0019953
Eupl14g00002 103 PRINTS Major pollen allergen Lol pI signature 5 20 IPR005795 GO:0005576|GO:0019953
Eupl14g00002 103 PANTHER EXPANSIN-B3 2 101 - -
Eupl14g00002 103 SUPERFAMILY PHL pollen allergen 2 97 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00002 Eupl-Chr14 25628 25939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00002 2 101 Expansin Gene Family AT1G65680 58.000 1.30e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00002 - - nnu:104608780 172.94