Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01931 ATGGCTCAACAGTCGTCTCGTCTTCATCGCTTGCTCACTCTGTTGGACACTGGTTCAACTCAAGCAACGAGATTTGCAGCCGCTCGTCAAATTGGGGATATTGCAAAGTCACATCCCCAAGACTTGAGCTCTCTCTTAAGGAAGATTTCTCAATATCTTCGTAGTAAGAATTGGGATACAAGGGTTGCTGCTGCTCATGCTGTCGGGACAATTGCTGAGAATGTTAAGCACACATCTGTGAAAGAACTATTTGCATGTGTCGAAATGGAGATGTTGGAGACAGGAATTTCCGGTGTTGTTGAAGATGTGGTGATGGCATGGCCAAACTTCCATCCTAAAATTGTAGCCGACCTCTCTTTCAGAAGCTTTGACATTAACAAGGTGTTGGAGTTTGGTGCTTTATTGGCATCTGGGGGGCAGGAATATGATATTGCAAGTGATAATAGCAAGAATCCCGTGGAGCGATTAGCCCGTCAGAAACAGAATCTTCGGCGCCGTTTGGGTTTGGATGTATGTGAGCAGTTTATGGATGTCAGTGATATGATTAGAGATGAAGATCTTATTGTGCACAAATTTAGTTCCCATGGAAATGGGATGGACCATAGATATTATTCATCGCAGTCTGGAAACCGGATCCAACAACTAGTTGCAAATATGGTTCCCAGTTTTACTAAAAGACCAAGTGCAAGGGAATTGAATCTTTTAAAACGGAAAGCAAAGATAAATGCAAAAGACCAAACAAAAGGCTGGTCTGAAGATGGGGATGTTGAGGTACCACATTCTCAGAATTCAGTGACAACAAAGGTTGCACTTCCAGATCCGTCTAGTAAGATGATTCTGGATGCTGTTCTAAATGAAGATAACTTTGATTTTGATGGAGATGGGCGGTGGCCTTTCCAAAATTTTGTAGAGCAACTCATCCTTGATATGTTTGATCCCATTTGGGAGGTACGCCATGGTAGTATGATGGCTCTGAGGGAAATTTTATCCCAGCAAGGTGGTTCTGCTGGAGTATTTATGCCCGACTTGAGCTCGGAAAATGCATATTTAGTTGAAATTGAAGACAAATATAATCTGAACACATTAAAGAGAGAGAGGGAAATTGATCTAAATATACAAGTTGCAGTGGAGGAGTCTGAGGCAGACTGGAAAAGACCTAAATCGGAAGATGCATCATGTACATTAATAAATACAACGGCCTCTGTAGACAATGAGGGTAACCTTGGTGTCTGCTTAAAGATTGAAGATGGTGGATGGAGTTCGGACCCTGCACGGGATAACTGTGTGCTTAACATTAGTCCTGTTAAGGTGGAGCCTGAGGCTTACATGGATGGCCTTCATTTTCAGTCTAAAGAAGTTGGTGGTATGGTAGAGCAAAAAATTTTTAGTGAAGATAGGAGCTCGATGACAAAGATGGACATACTGAAAAATCTTCCGGAAAGCTGCAAATTGATGAAATTGGTCAAACTAGCAAGACATTCATGGATTAAAAATTGGGAATTTCTTCAAGATTGTGCCATTCGCTTCCTGTGTGTTTTATCATTGGACCGTTTTGGAGATTATGTTTCTGACCAGGTTGTTGCTCCAGTTCGGGAAACTTGTGCGCAAGCACTTGGTGCCGTGCTTAAGTACATGCATCCCTTGTTAGTTCATGAAACACTGAACATCTTGCTGCAAATGCAGTGTCGACCAGAATGGGAAATTCGTCATGGGAGCCTTTTAGGTATCAAGTATTTGGTTGCTGTAAGACGGGAAATGCTCCATGGTTTGCTCGGCTGCGTTCTTCCTGCTTGTAAAGCGGGTCTGGAAGACCCAGATGATGATGTTAGAGCAGTTGCTGCTGAGGCTTTATTACCCGCTGCATCTGCTATAGTTTCTCTTAATGGTCAAACATTGCATTCCATCGTTATGCTACTTTGGGATATTTTGCTTGACCTGGATGACCTAAGTCCATCCACGAGCAGTGTTATGAATCTGTTGTCAGAAATCTATTCTCAAGAAGAGATGATTCCGAAGATGTTGGGAACATTGACATTGAAAGAGAAGCAAGGATTCGATCTTAATGAAGTAGTTCAGATTGATGAACATGGAGAGGGAATTAAGTCTCAGGGGAATCCTTATATGTTATCAACGCTTGCACCACGATTATGGCCATTTATGAGGCACAGTATTACTTCAGTTCGTCATTCGGCTATGCGCACTTTGGAGCGGCTGCTTGAAGTTGGATGTAAAAGGAGCTCATCTGAGTACACAGCTAGTTCTTTCTGGCCTTCTTTTATTTTGGGGGATACCCTAAGGATTGTTTTTCAAAACTTGCTCCTGGAATCAAATGAGGCAATTCTGCAATGTTCAGAGAGGGTCTGGAGGCTCCTGCTTCAGTGTCCAGAGGGGGATTTGGAAACTGCCGCGAGATCATATTTTTCTTCTTGGATGGAGCTTGCAACTACTGCATATGGTTCACCCCTGGATGCTACAAAAATGTTTTGGCCAGTAGCCCTTCCTCGGAAAAGCCATTTTAGAGCTGCTGCTAAGATGAGAGCTGTAAAACTAGAAAATGACTCCAGTAGAAACTTTGGTTCTGACTCTGCAAAAGGACCTATTTCGCAGGAGAGAAATGGAGAGGTTTCTATCAATTTTGTTAAGATTATTGTTGGTGCAGATGGTGAAAAATCAGTTACTCGTACACGTGTAGTTACAGCAGCAGCATTGGGTATTTTTGCATCTAAGTTGCCTGAGGGGTCTTTGCAATTTGTAATTGATCCATTATGGAAGGACCTTTCCTCTTTATCTGGGGTCCAAAGACAGGTGGCTTCCATGATTCTTGTCTCTTGGTTCAAAGAGCATCATAGTAAGGCCCTCTCTGGAATGCATGTAATTATGCCTGGATTTGTCGGTCATTTTAGGCAATGGCTGTTGGATTTGTTAGCATGTGCTGATCCTGCATTGCCTACGAAAGATTCACTTCTTCCTTATGCTGAGCTTTCAAGAACTTATGCGAAGATGCGTGGCGAGGCCACTCTCTTGTTCCGTGCAGTTGACTCGTTTGGCATATTAAAGAGTATGTTGCCAACTACGAAGTTTAACCTGGATACCTTAAGTGTTGATGATGCAATCAGTTTTGTGTCAAAACTTTCACTGCCGAGTAACCACTCGACTGGCGATGAAACTATGGAAAGACACGTTCTTGATGATTTAGAGACGTCAAAGCAACGACTTTTGACAACTTCAGGCTATTTAAAGTGTGTGCAGAGCAATTTGCATGTTACTGTCTCGAGCCTAGTGGCAGCTGCTGTAGTCTGGATGTCTGAGCTGCCTGCTAGGCTTAATCCGGTGATTTTGCCTTTGATGGCTTCTATAAAAAGAGAGCAGGAGGAAATACTGCAACAGAAGGCAGCTGAAGCACTTGCTGAGCTTATTTCTCATTGTATCGCACGTAGGCCTGGTCCAAATGATAAATTAATTAAGAACCTTTGTAGTTTAACATGCATGGATCCTTGTGAGACACCCCAAGCTGCAGTCATAAGTTCCATGGAGATTATTGAAGATCAAGATCTGTTGTCCTTCGGAAGGAGTGTAGGTACTCATAAGGGGAAGGTTCATTTGCTAGCTGGTGGTGAAGACCGGTCAAGGGTTGAAGGTTTTATAAGCAGGCGCGGGTCAGAACTTGCATTGAAGCATCTGAGTGAGAAGTTTGGTGGTACTTTATTTAATGAGCTTCCTAAATTGTGGGATTGCCTTACCGAAGTTCTCAAGCCTGATAGTCCTGAAGGAGTGATGACTAAAGAGAGCCAGCAAAGGACATTGACAATTGATTCTGTGAAGGATCCACAGATCCTGATAAACAATATTCAGGTGGTACGTTCTATTGCACCTATGCTGGATGAGACATTAAAGCCCAAATTGCTCACACTTCTTCCATGTATCTTTAAATGTGTGTGCCATTTCCATGTTGCTGTTCGATTAGCTGCTTCAAGGTGTATCACATCAATGGCCAAGTCGATGACATTAAGTGTGATGGGAGCTGTGATTGAGAAGGCTATACCTATGTTGGAGGACTCATCATCTGTTCATGCTAGACAAGGTGCTGGTATGCTAGTAAGTTTGCTTGTTCAGGGATTGGGGGTGGAGCTGGTCCCATATTCTCCTTTCTTAGTTGTTCCTCTTCTGAGGTGTATGAGTGATAGTGATCCTGCTGTCAGACAAAGTGTGACACATAGTTTTGCTGCCCTTGTACCTCTTCTTCCATTAGCAAGGGGCCTCCCTCCACCAATTAGACTGAGTGAAGGTATATCTGGAAATACGGAAGATGCGCAGTTTCTGGAGCAACTACTTGACAACTCCCATATCGATGACTACAAGCTTTCCACCGAATTAAAAGTGGCACTGCGGAGGTATCAGCAAGAGGGTATAAATTGGTTATCTTTCTTGAGACGTTTCAAGCTTCACGGGATCTTATGTGATGATATGGGACTTGGTAAAACACTTCAGGCATCAGCAATTGTGGCATCTGACATAGCAGAGCGCCGTGCATCCAACAGTGGCAAGGACCTTCTATCTTTGATTATTTGTCCATCAACGCTGGTTGGACACTGGGCCTATGAAATAGAAAAGTACATTGACACTTCTGTGTTGACACCTCTCCAGTATGTTGGTTCTGCTCAAGAGCGCACTTCTCTTCGAAGTCATTTTGAAAAGTATACTGTCATCATAACATCATATGATGTGGTCCGTAAAGACATCGACTATCTAGGACAACTTGTCTGGAATTATTGTATTTTAGACGAGGGACATATCATCAAGAACTCGAAGTCTAAAATTACTGGTGCAGTGAAACAATTGAAAGCCGAACACCGCCTTATACTGAGTGGAACACCGATACAGAATAACGTCTTGGAGCTGTGGTCCCTTTTTGACTTTCTAATGCCAGGGTTTCTTGGAACAGAGCGACAATTCCAAGCCACTTATGGGAAACCACTGCTAGCAGCTAAAGATTCAAAATGTTCTGCCAAGGATGCTGAAGCGGGAGCACTTGCTATGGAAGCATTGCACAAACAGGTCATGCCATTCCTCCTTCGTCGAACAAAGGATGAGGTTTTGTCTGATCTGCCGGAGAAAATTATTCAGGACAGATACTGTGACCTGAGTCCCATCCAGTTAAAACTTTACGAACAGTTCTCTGGATCAAATGTGAGAAATGAAATCTCAACTTTGGTAAAAGTGAATGACTCACCAGACACGGCAAAAGGAAATAGCCCTTCACCAAAAGCATCTTCACATGTCTTCCAGGCACTTCAATACTTGCTAAAACTTTGTAGTCATCCATTGCTCGTTGTCGGTGAAAAGGCTCCAGCTTCCCTCACGAACCTTTTTTCAGAACTCAACCCTGGAAGTGGTGACATTATTTTGGATCTTCATGAACTGCACCACTCTCCCAAATTAGTTGCTCTTCATGAAATACTGGAAGAGTGTGGAATAGGGTTGGACACTTCAAGTTCTGAAGGTGCTATTGGTGTTGGACAGCATAGAGTTTTGATATTTGCTCAGCACAAAGCCTTTCTGGACATAATTGAAAGAGATTTATTTCAAACTCATATGAAGAGTATCGTGTATTTGCGGCTGGATGGCTCTGTTGAACCAGAAAAACGTTTTGAAATTGTGAAAGCTTTCAATTCAGACCCTACTATTGATGTACTCCTGCTCACAACACATGTTGGTGGGCTTGGTTTGAACCTAACATCAGCGGACACACTCGTTTTCATGGAGCATGATTGGAATCCAATGAGAGATCTCCAGGCAATGGACAGAGCCCACAGACTGGGTCAACGCAAAGTCGTGAACGTCCATCGTCTCATCATGCGTGGAACCCTGGAAGAGAAAGTTATGAGCCTTCAAAAGTTCAAAGTGTCAGTCGCTAATTCTGTCATTAATGCGGAGAATGCCAGTCTGAAAACAATGAATACAGACCAATTGCTTGATCTATTCACATCTGCGCAAACTGGTAGAAAGGCTGCTGCCCTCTCGAAGAGTTCTGATGGAAACTTCAATGGAGAACCAAGATCAGTGGGTGGTGGGAAGGGATTGAAAGCTATCCTTGGTGGATTGGAGGAGCTCTGGGATCAATCACAGTATGCAGAGGAATACAATCTCAGCCAGTTCTTAGCAAAGCTTAATGGCTGA 6177 0.4316 MAQQSSRLHRLLTLLDTGSTQATRFAAARQIGDIAKSHPQDLSSLLRKISQYLRSKNWDTRVAAAHAVGTIAENVKHTSVKELFACVEMEMLETGISGVVEDVVMAWPNFHPKIVADLSFRSFDINKVLEFGALLASGGQEYDIASDNSKNPVERLARQKQNLRRRLGLDVCEQFMDVSDMIRDEDLIVHKFSSHGNGMDHRYYSSQSGNRIQQLVANMVPSFTKRPSARELNLLKRKAKINAKDQTKGWSEDGDVEVPHSQNSVTTKVALPDPSSKMILDAVLNEDNFDFDGDGRWPFQNFVEQLILDMFDPIWEVRHGSMMALREILSQQGGSAGVFMPDLSSENAYLVEIEDKYNLNTLKREREIDLNIQVAVEESEADWKRPKSEDASCTLINTTASVDNEGNLGVCLKIEDGGWSSDPARDNCVLNISPVKVEPEAYMDGLHFQSKEVGGMVEQKIFSEDRSSMTKMDILKNLPESCKLMKLVKLARHSWIKNWEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAVLKYMHPLLVHETLNILLQMQCRPEWEIRHGSLLGIKYLVAVRREMLHGLLGCVLPACKAGLEDPDDDVRAVAAEALLPAASAIVSLNGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLSEIYSQEEMIPKMLGTLTLKEKQGFDLNEVVQIDEHGEGIKSQGNPYMLSTLAPRLWPFMRHSITSVRHSAMRTLERLLEVGCKRSSSEYTASSFWPSFILGDTLRIVFQNLLLESNEAILQCSERVWRLLLQCPEGDLETAARSYFSSWMELATTAYGSPLDATKMFWPVALPRKSHFRAAAKMRAVKLENDSSRNFGSDSAKGPISQERNGEVSINFVKIIVGADGEKSVTRTRVVTAAALGIFASKLPEGSLQFVIDPLWKDLSSLSGVQRQVASMILVSWFKEHHSKALSGMHVIMPGFVGHFRQWLLDLLACADPALPTKDSLLPYAELSRTYAKMRGEATLLFRAVDSFGILKSMLPTTKFNLDTLSVDDAISFVSKLSLPSNHSTGDETMERHVLDDLETSKQRLLTTSGYLKCVQSNLHVTVSSLVAAAVVWMSELPARLNPVILPLMASIKREQEEILQQKAAEALAELISHCIARRPGPNDKLIKNLCSLTCMDPCETPQAAVISSMEIIEDQDLLSFGRSVGTHKGKVHLLAGGEDRSRVEGFISRRGSELALKHLSEKFGGTLFNELPKLWDCLTEVLKPDSPEGVMTKESQQRTLTIDSVKDPQILINNIQVVRSIAPMLDETLKPKLLTLLPCIFKCVCHFHVAVRLAASRCITSMAKSMTLSVMGAVIEKAIPMLEDSSSVHARQGAGMLVSLLVQGLGVELVPYSPFLVVPLLRCMSDSDPAVRQSVTHSFAALVPLLPLARGLPPPIRLSEGISGNTEDAQFLEQLLDNSHIDDYKLSTELKVALRRYQQEGINWLSFLRRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSGKDLLSLIICPSTLVGHWAYEIEKYIDTSVLTPLQYVGSAQERTSLRSHFEKYTVIITSYDVVRKDIDYLGQLVWNYCILDEGHIIKNSKSKITGAVKQLKAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFQATYGKPLLAAKDSKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPIQLKLYEQFSGSNVRNEISTLVKVNDSPDTAKGNSPSPKASSHVFQALQYLLKLCSHPLLVVGEKAPASLTNLFSELNPGSGDIILDLHELHHSPKLVALHEILEECGIGLDTSSSEGAIGVGQHRVLIFAQHKAFLDIIERDLFQTHMKSIVYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSVANSVINAENASLKTMNTDQLLDLFTSAQTGRKAAALSKSSDGNFNGEPRSVGGGKGLKAILGGLEELWDQSQYAEEYNLSQFLAKLNG* 2059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01931 2058 CDD SF2_C_SNF 1803 1951 - -
Eupl13g01931 2058 Gene3D - 3 99 IPR011989 -
Eupl13g01931 2058 Gene3D - 505 760 IPR011989 -
Eupl13g01931 2058 Gene3D - 1703 2013 IPR027417 -
Eupl13g01931 2058 Pfam Helicase conserved C-terminal domain 1839 1940 IPR001650 -
Eupl13g01931 2058 CDD DEXHc_Mot1 1462 1693 IPR044078 GO:0005524
Eupl13g01931 2058 Pfam SNF2-related domain 1480 1776 IPR000330 GO:0005524|GO:0140658
Eupl13g01931 2058 Gene3D - 889 1418 IPR011989 -
Eupl13g01931 2058 FunFam TATA-binding protein-associated factor BTAF1 1 96 - -
Eupl13g01931 2058 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 4 2057 IPR044972 GO:0003677|GO:0016887|GO:0017025
Eupl13g01931 2058 FunFam TATA-binding protein-associated factor BTAF1 1209 1420 - -
Eupl13g01931 2058 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1831 1990 IPR001650 -
Eupl13g01931 2058 FunFam TATA-binding protein-associated factor 1703 2018 - -
Eupl13g01931 2058 SMART helicmild6 1854 1940 IPR001650 -
Eupl13g01931 2058 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1474 1643 IPR014001 -
Eupl13g01931 2058 SMART ultradead3 1458 1654 IPR014001 -
Eupl13g01931 2058 SUPERFAMILY ARM repeat 6 1501 IPR016024 -
Eupl13g01931 2058 Pfam Domain of unknown function (DUF3535) 787 1245 IPR022707 -
Eupl13g01931 2058 MobiDBLite consensus disorder prediction 245 265 - -
Eupl13g01931 2058 FunFam B-TFIID TATA-box-binding protein-associated factor 1 1432 1692 - -
Eupl13g01931 2058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1694 1999 IPR027417 -
Eupl13g01931 2058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1446 1693 IPR027417 -
Eupl13g01931 2058 Gene3D - 1433 1692 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01931 Eupl-Chr13 40049562 40124481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01931 1434 1994 RAD5 or RAD16-like Gene Family AT1G02670 27.333 8.20e-43 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Eupl13g01931 DUF3535 2.1e-99 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01931 K15192 - ming:122072927 3182.5