Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01926 ATGAGTGAGGAAATACAAGAAGATGAGTTCAAGCTTACTGAGGTGGATGACACCATTAATGGGTCTGTAGGAAGAAGGTTGTTTCTGGTCTCTAGAGAAATTAATGGACTTGGGAAGAGCAAGTGGGAAAGTAGCAATCCTCCCAGAATCCCAAAGGATAGCTATGAAGGCTTTGTTATACATCCTAATGGAAGATTTTATAGGTGTTGGGTGAACATAATATTCTTATGGTCCATCTATTCGTCCTTCTTCACACCATTGGAGTTTGGATTTTTTAGAGGTTTGCCGGACCATTTGCGGAACCTTGACAGTGTACAGTTAGTCTTCTTTGCAGATGTGATCCTGCAATTCTTTGTCGCCTATAGAGACCTCCACACCTACAACATGGTGTACGACAGAAAAAGCATTGCCATGCGTTATGTGAAGGGAAGTTTCGCATTAGATCTTCTTGGGTGTTTTCCTTGGGACGCCATCTACAAGGCAACGGGAAGAAGAGAACTAGTAAGGTGCCTCATTTGGATCCGACTCTATCGAGCACGAAAAATCGAAGGGTTCTTCCAAATGATGGAGAAGGATATTCGCATCAACTACTTATTCACTAGGATAGTGAAACTTATTACAGTGGAGTTGTATTGCACACACACGGCTGCTTGCATTTTCTACTACCTTGCAACCACAGTTCCGCCAGCAAAGGAGGGTCATACATGGATAGGCAGCTTGAGGCTAGGGGACTACAAATATATCAACTTCAGGGAAATAGACTTTTGGAGGCGATATATAACATCCCTATACTTCGCCATCGTCACCATGGCAACAGTTGGTTATGGTGATATTCATGCGGTGAACACCAGGGAGATGATTTTTATTATGATTTTTATCTCCTTTGACATGATACTTGGGGCCTACTTGATTGGTAATATGACCGCTCTGATTGTCAAAGGCTCCAACACGGAGAGATTTCGGGATAAAATGACGGATCTCATAAAATACATGAACAGGAACAAGCTGGATAAGGATATCAGGTCACAAATAAAAAGCCACCTGAGGCTACAATATGAGAGTAGCTACAGTAAAGGTAGCGTCCTCGAAGACATCCCCGTAGCTGTCCGATCCAAGATTTCTCAGACTTTATACATGGAGACAGTTCAACAAGTCCTGCTTTTCAAAGGATGTTCAGACGAATTACTAAATCAGATAGTTATGAAGCTGAACAAAGAGTTTTTTCTCCCAGGAGAAGTTATTCTTGAACAAGGCGGTGCTGTGGATCAAGTTTATATTGTATCTAGTGGACGCTTGGAAGAGGTAGCTATTGGGGAAGATGGGTCAGAAGAATTCATTGCAGAGCTTAAGCCCCACAGTATATTTGGTGAAGTTGCAGTGCTGTGCAATATTCCTCAGCCATATACAGTTCGTGTCTGTGAATTATGCATACTTCTACGAATAGAAAAGCAAACCTTGACTAGTATCTTGAAACTTTACTTCACAGATAGCCGCCAGATTCTCAATAATCTCCTTAAGGGAAAAGATACTGATCTTAGAATCAAGCAGCTGGAATCAGATATTACTTATCTAATTGCAAAGCAAGATTCTGAGCTCGCATTAGGAGTAAACAGTGCTGCTTATCATGGGGACTTGTATAATCTGAAAGGCTTGATCAATGCTGGAGCTGATCCAGGCAAAACCGACTATGATGGGAGAAGCGCACTCCATTTGGCTGCATCTAGAGGCTACGAAGATATTGTGAGATTTCTCATACAACGAGGAGCGAATGTCAATTGCATAGATAAGTTTGGGAGTTCACCTTTGTTGGAGGCTCTCAAGGCTGGGCATGACAGAGTTGCTGCGCTTCTCATAAAAAATGGTGCAATTTTGAATTTGGAAGATGCTGGAAGCTATCTCTGCAGAGTTGTAATGGATGGAAATATTGACTTCTTGAAACGCTTGTTGGATAATGGAGTTGACCCAAACTCGAAGAACTATGACCAAAGAACCCCTCTACATGTTGCAGCTGCAGAAGGTTTGCACCTTGTGGCAAAAATCTTGATCAAGTTTGGAGCAGATGTTCTTTCTGTAGATAGGTGGGGAAACACTCCTCTTGATGAAGGACAAAGATGTGGAAGCAGACCTTTACTCAAGATATTGGAGCAAGCTAAAGAGGATTGCCTGGCTAGACATAGTGATTCTTTCAGAGGGATGACAAGAGGTAACTCTTTTGAAGGTACTAAAGATGCCAATGCAGAAAGGGAAGGCAAACACCTGGAAGGTTGA 2268 0.4224 MSEEIQEDEFKLTEVDDTINGSVGRRLFLVSREINGLGKSKWESSNPPRIPKDSYEGFVIHPNGRFYRCWVNIIFLWSIYSSFFTPLEFGFFRGLPDHLRNLDSVQLVFFADVILQFFVAYRDLHTYNMVYDRKSIAMRYVKGSFALDLLGCFPWDAIYKATGRRELVRCLIWIRLYRARKIEGFFQMMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTVPPAKEGHTWIGSLRLGDYKYINFREIDFWRRYITSLYFAIVTMATVGYGDIHAVNTREMIFIMIFISFDMILGAYLIGNMTALIVKGSNTERFRDKMTDLIKYMNRNKLDKDIRSQIKSHLRLQYESSYSKGSVLEDIPVAVRSKISQTLYMETVQQVLLFKGCSDELLNQIVMKLNKEFFLPGEVILEQGGAVDQVYIVSSGRLEEVAIGEDGSEEFIAELKPHSIFGEVAVLCNIPQPYTVRVCELCILLRIEKQTLTSILKLYFTDSRQILNNLLKGKDTDLRIKQLESDITYLIAKQDSELALGVNSAAYHGDLYNLKGLINAGADPGKTDYDGRSALHLAASRGYEDIVRFLIQRGANVNCIDKFGSSPLLEALKAGHDRVAALLIKNGAILNLEDAGSYLCRVVMDGNIDFLKRLLDNGVDPNSKNYDQRTPLHVAAAEGLHLVAKILIKFGADVLSVDRWGNTPLDEGQRCGSRPLLKILEQAKEDCLARHSDSFRGMTRGNSFEGTKDANAEREGKHLEG* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat profile. 597 629 IPR002110 GO:0005515
Eupl13g01926 755 MobiDBLite consensus disorder prediction 741 755 - -
Eupl13g01926 755 Pfam Cyclic nucleotide-binding domain 407 491 IPR000595 -
Eupl13g01926 755 FunFam Potassium channel KAT2 375 511 - -
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Eupl13g01926 755 Gene3D Jelly Rolls 375 506 IPR014710 -
Eupl13g01926 755 Pfam Ankyrin repeats (3 copies) 539 628 IPR002110 GO:0005515
Eupl13g01926 755 Pfam Ankyrin repeats (3 copies) 635 714 IPR002110 GO:0005515
Eupl13g01926 755 SUPERFAMILY Ankyrin repeat 527 717 IPR036770 -
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat region circular profile. 661 688 - -
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat region circular profile. 564 596 - -
Eupl13g01926 755 FunFam Potassium channel SKOR 68 312 - -
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat region circular profile. 597 628 - -
Eupl13g01926 755 MobiDBLite consensus disorder prediction 732 755 - -
Eupl13g01926 755 PRINTS EAG/ELK/ERG potassium channel family signature 303 312 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01926 755 PRINTS EAG/ELK/ERG potassium channel family signature 259 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01926 755 PRINTS EAG/ELK/ERG potassium channel family signature 211 221 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01926 755 CDD CAP_ED 387 501 IPR000595 -
Eupl13g01926 755 SUPERFAMILY Voltage-gated potassium channels 62 312 - -
Eupl13g01926 755 SMART cnmp_10 387 505 IPR000595 -
Eupl13g01926 755 Gene3D - 70 313 - -
Eupl13g01926 755 Gene3D Helix hairpin bin 314 374 - -
Eupl13g01926 755 Pfam Ion transport protein 68 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl13g01926 755 SMART ANK_2a 661 690 IPR002110 GO:0005515
Eupl13g01926 755 SMART ANK_2a 531 560 IPR002110 GO:0005515
Eupl13g01926 755 SMART ANK_2a 564 593 IPR002110 GO:0005515
Eupl13g01926 755 SMART ANK_2a 597 626 IPR002110 GO:0005515
Eupl13g01926 755 SMART ANK_2a 628 657 IPR002110 GO:0005515
Eupl13g01926 755 SUPERFAMILY cAMP-binding domain-like 315 505 IPR018490 -
Eupl13g01926 755 Gene3D - 534 628 IPR036770 -
Eupl13g01926 755 Gene3D - 629 729 IPR036770 -
Eupl13g01926 755 ProSiteProfiles cAMP/cGMP binding motif profile. 387 507 IPR000595 -
Eupl13g01926 755 ProSiteProfiles Ankyrin repeat profile. 661 693 IPR002110 GO:0005515
Eupl13g01926 755 PANTHER POTASSIUM CHANNEL AKT1 46 722 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01926 Eupl-Chr13 39914372 39937648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01926 640 714 Ion Channels AT5G37500 30.928 2.50e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01926 K21867 - msin:131242711 1219.14