Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl13g01923 | ATGGACCTTTCCAATCAAGAAGGGGAGATTCCAATCCCAATAACCATGGCCAGCACTTTTGTTGGGGGACATAGTCATGGTCATGGGCATGGTCACATGATCCATCATGACCCCCCTCCTCACAACCACATAGTCCCTTCTTCAGCACCCCAACTCTCCTCCAATGGCCCCATCCCTACATCCTTAGAGGACCACATGCCCTACAAGAAGGTGATTAGATACAGGGAGTGCCTCAAGAACCATGCAGCAGCCATGGGTGGAAATGCCACTGATGGGTGTGGTGAGTTCATGCCAAGTGGAGAAGAAGGCAGCCTTGAAGCCCTCAAGTGTTCAGCCTGCAACTGCCACAGAAACTTCCACAGGAAAGACATGGAAGGTGAGTCCTCCTCATGTGACTGCTACCACCACCCCCATCTCAACAAAATGGGGAGGAAGGTCATTGTGAGCCACCACAAGGTTTTGGGATCAGAGGCCTTTGGGTACCCTACAGGCACCCTCATCCCTACAAGAGCACCACCACCCCACCAGATGATAATGTCCTACAACTTAGGATCCAACCCTTCAGAGTCTGATGAGCAGGAAGATGGTGTTGGGGTTGCAGTAAGACCACCCCAACCGGTGAAAAAAAGGTTCAGGACCAAGTTCAGCCAAGAACAGAAGGAGAAGATGTTGGCATTTGCAGAAAAGGTTGGGTGGAGGATACAGAAGCAAGAGGAATCTGTGGTGCAGCAATTCTGTCAAGAGATTGGAGTCAAGAGGAGAGTCCTTAAGGTGTGGATGCACAACAACAAGCACAGCTTGGCCAAGAAGAATTCTTCTGCTTCTACTACTTGA | 834 | 0.5036 | MDLSNQEGEIPIPITMASTFVGGHSHGHGHGHMIHHDPPPHNHIVPSSAPQLSSNGPIPTSLEDHMPYKKVIRYRECLKNHAAAMGGNATDGCGEFMPSGEEGSLEALKCSACNCHRNFHRKDMEGESSSCDCYHHPHLNKMGRKVIVSHHKVLGSEAFGYPTGTLIPTRAPPPHQMIMSYNLGSNPSESDEQEDGVGVAVRPPQPVKKRFRTKFSQEQKEKMLAFAEKVGWRIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHSLAKKNSSASTT* | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl13g01923 | 277 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 74 | 123 | IPR006456 | - | |
Eupl13g01923 | 277 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 56 | 266 | - | - | |
Eupl13g01923 | 277 | FunFam | Zinc-finger homeodomain protein 2 | 199 | 269 | - | - | |
Eupl13g01923 | 277 | NCBIfam | homeobox domain, ZF-HD class | 208 | 264 | IPR006455 | - | |
Eupl13g01923 | 277 | SUPERFAMILY | Homeodomain-like | 202 | 269 | IPR009057 | - | |
Eupl13g01923 | 277 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 73 | 123 | IPR006456 | - | |
Eupl13g01923 | 277 | Pfam | ZF-HD protein dimerisation region | 72 | 124 | IPR006456 | - | |
Eupl13g01923 | 277 | Gene3D | - | 200 | 270 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl13g01923 | Eupl-Chr13 | 39872649 | 39874745 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl13g01923 | 69 | 272 | ZF-HD Transcription Factor Family | AT1G14440 | 58.447 | 2.10e-78 | 238 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Eupl13g01923 | ZF-HD_dimer | 7.3e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl13g01923 | - | - | nnu:104593910 | 453.751 |