Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01920 ATGGCTTCTCTCGCAGCATCCACCGCTTCAGCCTCTTTAGGCGTCTCGGAAATGCTCGGAAACCCTCTCAATTTTACGGGTTCTGCTCGAACTGCTCCGTCGGCGACGAGCCCAGCAACATTCAAGACTGTCGCTCTCTTCTCAAAGAAGAAATCGCCACCCCCAAAATCAAAGACTGCTGCGGTTTCTCCTGTGACCGAAGAGCTCGCCAAGTGGTACGGTCCTGACAGGAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCAGATGTTCCCGAGTACCTCACAGGAGAAGTTCCCGGAGATTATGGTTATGATCCATTTGGACTGAGCAAGAAACCAGAAAACTTCGCCAAATACCAGGCTTATGAGCTCATTCATGCCCGGTGGGCCATGCTCGGTGCTGCTGGCTTCATCATCCCAGAAGCCTTCAACAAATTCGGCGCTAACTGTGGTCCTGAAGCAGTTTGGTTCAAGACTGGAGCTCTACTCTTGGACGGTAACACGCTGAATTACTTCGGAAAGAATATCCCAATCAATCTTGTTCTTGCCGTCGTCGCCGAGGTTGTTCTTCTTGGTGGTGCTGAATATTACAGAATCATCAATGGCCTGGACTTGGAGGACAAGCTTCATCCTGGTGGTCCATTTGATCCGTTGGGGCTTGCAAATGATCCAGACCAGGCAGCACTATTGAAGGTGAAGGAGATTAAGAACGGGAGACTTGCCATGTTTGCGATGCTTGGTTTCTTCATCCAGGCTTACGTTACGGGCAAAGGACCTGTTGACAACCTTGCAGCCCATCTCAGTGACCCTTTTGGTAACAATTTACTCACTGTGATTTCAGGATCTGTTGAACGGGCTCCTACTCTGTAA 873 0.5017 MASLAASTASASLGVSEMLGNPLNFTGSARTAPSATSPATFKTVALFSKKKSPPPKSKTAAVSPVTEELAKWYGPDRRIFLPEGLLDRSDVPEYLTGEVPGDYGYDPFGLSKKPENFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGKGPVDNLAAHLSDPFGNNLLTVISGSVERAPTL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01920 290 Pfam Chlorophyll A-B binding protein 92 253 IPR022796 -
Eupl13g01920 290 FunFam Chlorophyll a-b binding protein, chloroplastic 79 290 - -
Eupl13g01920 290 Gene3D Chlorophyll a/b binding protein domain 79 290 - -
Eupl13g01920 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 34 281 IPR001344 GO:0009765|GO:0016020
Eupl13g01920 290 SUPERFAMILY Chlorophyll a-b binding protein 71 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01920 Eupl-Chr13 39839551 39843219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01920 11 290 Chloroplast and Mitochondria Gene Families AT4G10340 83.630 1.22e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01920 K08916 - cave:132180280 511.531