Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01911 ATGACTCCAGCTAATTTAGCAGGTCAGTTTGGAGACACTACTTACACTAAAGTGTTTGTTGGTGGGTTAGCTTGGGAGACCCAGATGGAGACCATGAGAAAATACTTTGAACAGTTTGGTGAGATCATGGAGGCTGTTGTGATTACAGATAAGCACTCTGGAAGATCCAAGGGCTATGGATTTGTAACTTTTCGTGAACCAGAAGCTGCTAAGAGAGCTTGTGTTGATGCTGCTCCTGTGATTGATGGGAGGAGGACTAATTGCAATCTTGCTTCTTTGGGTGCTCAAAGATCTAGACCTTCAACACCAAAACATGGAGGGGGGAGGAACTTTAGGGTAATGAACTGTTTTCAGACAGGCGTTCAAGGTGGGGTGGGAACAGCTTTTGCTTCTGCACCAACCTTCCCTCATTATGCCATCCAACAAGGGATTCCTTATAATGTATATGGGTACTCTCCATGCTCCCCGGATTACTCTTATCCTACGAGCTATTATGGTGTGTATGGAGGAGGGGCAGCAGGGCAGTATCCCATATACGGAGGAGGGGCAGGTGGGGTGGTAACAGGCAACACCACCGCCTTCTACCCGTATCTCCAGTTTGGGCAAAGCAACGGAGGGTCTGCCTCCTACCCGACCCGGCAGGGCTATGGCTTCCAATACCCCCACCACCTCTTTCAATACTCGGCCATGGACTCCACCGGATATCCGCCGCACTATGATGGGCCTATGTCGCTTGCACCCACTCCACCCACGCCAGCAGGCTTGACCATGGCTCTCACTGCTCCAACTCTTCATGCGGCTCCAACACCTCATCATCCCAATTCACTTCACCCCATCAACAGCATCTGA 849 0.5053 MTPANLAGQFGDTTYTKVFVGGLAWETQMETMRKYFEQFGEIMEAVVITDKHSGRSKGYGFVTFREPEAAKRACVDAAPVIDGRRTNCNLASLGAQRSRPSTPKHGGGRNFRVMNCFQTGVQGGVGTAFASAPTFPHYAIQQGIPYNVYGYSPCSPDYSYPTSYYGVYGGGAAGQYPIYGGGAGGVVTGNTTAFYPYLQFGQSNGGSASYPTRQGYGFQYPHHLFQYSAMDSTGYPPHYDGPMSLAPTPPTPAGLTMALTAPTLHAAPTPHHPNSLHPINSI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01911 282 PANTHER BOULE-RELATED 4 240 - -
Eupl13g01911 282 Gene3D - 4 111 IPR012677 -
Eupl13g01911 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Eupl13g01911 282 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Eupl13g01911 282 SMART rrm1_1 17 89 IPR000504 GO:0003723
Eupl13g01911 282 SUPERFAMILY RNA-binding domain, RBD 15 126 IPR035979 GO:0003676
Eupl13g01911 282 CDD RRM_RBM24_RBM38_like 16 91 - -
Eupl13g01911 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01911 Eupl-Chr13 39653709 39661139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01911 1 92 C2H2 Transcription Factor Family AT2G19380 38.043 6.41e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01911 - - nnu:104593951 397.127