Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01889 ATGGGCGAGGCATCTTCTTGTTCTGCTTCTTGCACTCTCATTCACGTATTGGTCGTTGATGACTGCCTGGTTGACCGTAAAATCGTTGAGAAGCTCCTCAAAAACGCCATGTTCAAAGTTACTACTGTTGATAGTGGAAAGAAGGCAATGGAGGTTCTCGGCTTGAACGAAGAGAAAGTTGAAATGCCCGTTAATGACCTCAAGATCGACATAATCCTCACTGATTATTGTATGCCGGGAATGAATGGTTATGACTTACTCAAGGTTGTCAAGGAGCACAGCCGCCTGAAAGCTATTCCTGTGGTCATAATGTCATCTGAACATGAACCGCAGAGAATCAGCAGTTGTCTTGCTACTGGAGCTGAGGATTTCTTCAGGAAGCCCCTACAACTAAGAGACCTACAGAGGTTGAGAAGCTATGTAAGGCCGACAACCCTGGTAGCCAAAACAGGCACAAAGAGAAAAGTGCCACTCGATTTGATGCCAGAGAGTAATGGACCTGAAAGGCGACCGCGCTTTGCTGGAGTTGCCGTTGCATGA 540 0.4667 MGEASSCSASCTLIHVLVVDDCLVDRKIVEKLLKNAMFKVTTVDSGKKAMEVLGLNEEKVEMPVNDLKIDIILTDYCMPGMNGYDLLKVVKEHSRLKAIPVVIMSSEHEPQRISSCLATGAEDFFRKPLQLRDLQRLRSYVRPTTLVAKTGTKRKVPLDLMPESNGPERRPRFAGVAVA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01889 179 MobiDBLite consensus disorder prediction 157 179 - -
Eupl13g01889 179 SMART REC_2 14 138 IPR001789 GO:0000160
Eupl13g01889 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 142 IPR045279 GO:0009736
Eupl13g01889 179 Pfam Response regulator receiver domain 16 135 IPR001789 GO:0000160
Eupl13g01889 179 CDD REC_typeA_ARR 16 137 - -
Eupl13g01889 179 ProSiteProfiles Response regulatory domain profile. 15 142 IPR001789 GO:0000160
Eupl13g01889 179 Gene3D - 14 172 - -
Eupl13g01889 179 SUPERFAMILY CheY-like 14 137 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01889 Eupl-Chr13 39274321 39279126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01889 1 156 Response Regulator Gene Family AT1G59940 51.923 2.37e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl13g01889 Response_reg 2.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01889 K14492 - psom:113347316 267.7