Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01886 ATGTCATTTTCAAAGGCATTTACTATTCTTCATGTTTTTTCGGCTATTTGGTTCCATTTCAGGCTCGAGACATTTTATTATATATTTATATTTGAAGTATTGGACACGGTCTTACTTTTGATCTCGAGTCTGTTACTGGAAAAAGAAACAATGTCTGAAGAAGCTAGGCAGATGATAGAGGCTTATGATGATCCCTCAGACCAAAGATCTTTGTCTTTGGACGATACCAGCAGCACTGAGGAATCACCAGAAGACACCAGGCTTTCTCTAGAATCATCGAATGATGTGATTCCGTTCATCGGCCAAAGATTTATTACTCATGATGCCGCATATGAGTTCTACAGTGAGTTCGCAAAGAGATGTGGTTTCTCGATCCGGCGTCATCGAACGGAAGGAAAAGATGGGGTCGGCAAAGGCCTGACAAGACGGTATTTTGTTTGCCATCGAGCTGGCAACACCCCAATCAAGGCATCGACCGAGAGTAAACCTCAGAGAAACCGCAAGTCTTCACGGTGTGGGTGCCAAGCTTACTTGCGAATCAGCAAGACCATGGACTTGGGGCTCCCAGAATGGCGTGTTACGGGCTTTGCAAACCACCACAACCATGAGCTCTTGGAACCGAACCAAGTCCGCTTCCTACCTGCCTACCGCACCATATCAGAGACCGACAAGAACCGGATCTTCATGTTTGCCAAGACTGGCATCTCTGTGCAGCAGATGATGAGGCTCATGGAGCTTGAGAAGTGCGTGGAGCCCGGATACTTGCCATTCACAGAGAAGGATGTGAGGAACTTACTTCAATCGTTTAGAAAAGTGGATCAGGAGGATGACAGCATCGATCTGCTAAGAATGTGCAAAAACATCAAGGAAAAAGACCCGAATTTCAGATATGAATACACGATTGATGCTAACAACAGGTTAGAGAACATCGCATGGTCCTATGGCTCATCAGTCCAATTGTACGATATCTTTGGTGATGCAGTGGTGTTTGACACAACACATCGCTTGACTGCCTTTGACATGCCGCTTGGGATCTGGGTTGGCATTAATAATTATGGCATGCCTTGCTTCTTTGGTTGTGTGCTCCTACGAGAGGAAAATATGCGGTCCTTCTCATGGGCATTGAAGGCATTCTTAGGGTTCATGAATGGGAAGGCTCCACAAACAATCCTGACTGACCAAAATATGTGTCTCAAAGAGGCACTAGTCATCGAAATGCCGAGAACTAAACATGCACTTTGCATTTGGCTGATTGTGGCAAAGTTCCCTTCTTGGTTTAATGCTGTTCTGGGGGAACGGTACAACGAGTGGAAGGCTGAGTTCTATAGGCTCTATAATCTCGAGACAATAGAGGACTTCGAACTGGGGTGGAGGGATATGGTCAATTCCTTTGGGCTACATACCAATAGGCACATTGCTAATTTGTTTGCCTTACGGACACTTTGGGCTTTACCGTACTTGAGAAGCCATTTCTTTGCTGGGATGACTACAACTGGCCAATCGAAGTCAATAAATGCTTTCATCCAACGGTTCTTGAGTGCGCAGACCCGGCTCGCACACTTTGTGGAACAAGTAGCTGTTGCGGTTGATTTTAAAGATCAAGCAGGAGAACAACAGACAATGCAACAGAATCTTCAGAACATTTGTCTCAAAACAGGGGCCCCCATGGAATCCCACGCAGCTTCAATTCTCACGCCTTACGCTTTCTGTAAGCTCCAAGAAGAACTCGTTTTAGCTGCACACTATGCATCGTTTCAGCTGGAAGATGGTTTTTACCATGTTAGACACCACACAAAGCTGGATGGAGGACGCAAAGTGTTATGGATCCCGCACGATGACATCATATCTTGTAACTGCCATCAGTTTGAGTTCTCTGGGATCCTGTGCCGGCATGCTCTTAGGGTCCTCTCGACAATGAATTGCTTCCAGATCCCAGAACAGTATCTACCCATACGTTGGCGTCGAATCAACACATCACTCACAAAACCCCTCCAGACTACCCCAAGTGATCATACTGAGCGAGTTCAGGCATTGCAGTCTATGGTATCAACTCTTCTTACGGAATCAGCGAAGACGAAGGAACGCTTGGATATTGCGACTGAGCAAGTTTCCATACTTTTATCTCGCATAAGGGAGCAACCGGCTTCAACACAGGGTTCGAGAGACCTCACCATCAACAGGATCCATTAA 2190 0.4598 MSFSKAFTILHVFSAIWFHFRLETFYYIFIFEVLDTVLLLISSLLLEKETMSEEARQMIEAYDDPSDQRSLSLDDTSSTEESPEDTRLSLESSNDVIPFIGQRFITHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASTESKPQRNRKSSRCGCQAYLRISKTMDLGLPEWRVTGFANHHNHELLEPNQVRFLPAYRTISETDKNRIFMFAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKVDQEDDSIDLLRMCKNIKEKDPNFRYEYTIDANNRLENIAWSYGSSVQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLREENMRSFSWALKAFLGFMNGKAPQTILTDQNMCLKEALVIEMPRTKHALCIWLIVAKFPSWFNAVLGERYNEWKAEFYRLYNLETIEDFELGWRDMVNSFGLHTNRHIANLFALRTLWALPYLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQAGEQQTMQQNLQNICLKTGAPMESHAASILTPYAFCKLQEELVLAAHYASFQLEDGFYHVRHHTKLDGGRKVLWIPHDDIISCNCHQFEFSGILCRHALRVLSTMNCFQIPEQYLPIRWRRINTSLTKPLQTTPSDHTERVQALQSMVSTLLTESAKTKERLDIATEQVSILLSRIREQPASTQGSRDLTINRIH* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01886 729 ProSiteProfiles Zinc finger SWIM-type profile. 592 640 IPR007527 GO:0008270
Eupl13g01886 729 SMART 26again6 615 642 IPR006564 GO:0008270
Eupl13g01886 729 Pfam MULE transposase domain 328 420 IPR018289 -
Eupl13g01886 729 Pfam SWIM zinc finger 615 638 IPR007527 GO:0008270
Eupl13g01886 729 MobiDBLite consensus disorder prediction 63 87 - -
Eupl13g01886 729 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 701 IPR031052 GO:0006355
Eupl13g01886 729 Pfam FAR1 DNA-binding domain 112 205 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01886 Eupl-Chr13 39209154 39231700 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl13g01886 MULE 3.2e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01886 - - nnu:104611074 1280