Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01859 ATGACAATCCCTGAAATCCAGAACCAGAGAGCCGGGGTTCGACACAGGGCTCGATCACCAACTCGAACCAGGGTGCCATTAAAGCGACTTTTCCGAGTTGCGTCAATGGCGTGTGGAGTTCAATTCGGTTGGGCTCTTCAACTCTCTCTCCTCACCCCATACGTGCAAGAGCTCGGGATCCCACACGCTTGGGCCAGCCTCGTTTGGCTATGTGGTCCGCTCTCTGGGTTACTGGTCCAGCCCTTGGTCGGTCACATGAGCGACCGATGCACCAGTCGGTTTGGTCGTCGCAGGCCTTTCATTGCAGCCGGAGCGGCATCAATCGTCGTCGCCGTTCTGATTATCGGGCATTCCGCGGACATCGGTCGAATACTCGGCGACAGAACGGAGTCCAGGCCGCGGGCCATCGCTGTCTTCGTTTTAGGGTTTTGGCTGCTTGACGTCGCTAACAACATGACTCAGGGACCTTGCAGAGCTCTCCTTGCCGATCTCACCGGGAAGGATCACAGAAGGACTCGCATAGCAAATGCGTATTTCTCCCTGTTCATGGCTGTTGGTAACATCCTTGGCTTTGCCACCGGATCCTACAGTGGCTGGTCCACCATTTTCCCCTTCACTATGACCTCCTCTTGCAGTGTTAATTGTGCCAATCTCAAGTCTGCTTTCTTTCTGGACGTTGCTTTTATTGTCTTCACCACGTATGTGAGCCTCTCAGCAGCCCAAGAACTGCCTCTAAGTTCCAGCTACAGATCTGCACACTCCACAGATGAAAGGCCAGAACAGTCTCACCATGCCCAGGAAGCTTTCCTTTGGGAATTGTTTGGCACTTTTAGGTACCTCTCAGGGCCGATATGGATAATCCTGATTGTTACTGCACTGACATGGCTTGGATGGTTTCCATTTCTTCTCTTTGATACTGATTGGATGGGAAGAGACATTTACAAAGGGAAGCCAAATGAAGGGCAGAATTATCATACCGGAGTAAGAATGGGCTCATTTGGTCTGATGTTGAATTCTGTTGTTCTTGGATTAACTTCAGTGGTAATAGAGAAACTATGCAGGAAGTGGGGTGGTGGTTTTGTCTGGGGGATTTCAAACATTCTTATGTCCTTGTGCTTTGTAACAATGCTGATAATATCCTTTGTGGTGAAGAATATGGAATTCTCGGGCCATGATCTTCCTCCTGACAGTGTTGTAATTACCGCACTAATTGTTTTTGCAGTTCTTGGTTTTCCATTGGCAATTACTTATAGCGTTCCTTATGCTATGATTTCCACTCGTACAGAGTCTTTAGGGCTTGGTCAAGGATTATCAATGGGTGTTCTGAATTTAGCTATTGTGATCCCACAGGTGGTGGTATCTCTGGGAAGTGGACCATGGGATCAGCTATTTGGAGGTGGGAACTCACCAGCCTTTGCCGTGGCAGCAGTTGCAGCCTTTGCCAGTGGAATAGTAGCCATATTGGCTCTTCCTCGATCTTATGCTGAGAGGCCTAGGACCCATCTGTAA 1509 0.493 MTIPEIQNQRAGVRHRARSPTRTRVPLKRLFRVASMACGVQFGWALQLSLLTPYVQELGIPHAWASLVWLCGPLSGLLVQPLVGHMSDRCTSRFGRRRPFIAAGAASIVVAVLIIGHSADIGRILGDRTESRPRAIAVFVLGFWLLDVANNMTQGPCRALLADLTGKDHRRTRIANAYFSLFMAVGNILGFATGSYSGWSTIFPFTMTSSCSVNCANLKSAFFLDVAFIVFTTYVSLSAAQELPLSSSYRSAHSTDERPEQSHHAQEAFLWELFGTFRYLSGPIWIILIVTALTWLGWFPFLLFDTDWMGRDIYKGKPNEGQNYHTGVRMGSFGLMLNSVVLGLTSVVIEKLCRKWGGGFVWGISNILMSLCFVTMLIISFVVKNMEFSGHDLPPDSVVITALIVFAVLGFPLAITYSVPYAMISTRTESLGLGQGLSMGVLNLAIVIPQVVVSLGSGPWDQLFGGGNSPAFAVAAVAAFASGIVAILALPRSYAERPRTHL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01859 502 CDD MFS_SLC45_SUC 30 469 - -
Eupl13g01859 502 Pfam MFS/sugar transport protein 42 427 - -
Eupl13g01859 502 MobiDBLite consensus disorder prediction 1 20 - -
Eupl13g01859 502 FunFam Sucrose transport protein 24 490 - -
Eupl13g01859 502 NCBIfam sucrose/proton symporter 25 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Eupl13g01859 502 Gene3D MFS general substrate transporter like domains 27 493 IPR036259 -
Eupl13g01859 502 SUPERFAMILY MFS general substrate transporter 29 493 IPR036259 -
Eupl13g01859 502 PANTHER SUGAR TRANSPORTER 24 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01859 Eupl-Chr13 38655893 38679922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01859 4 498 Sucrose Transporter Gene Family AT1G09960 67.742 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01859 K15378 - ming:122073852 832.017